Solicola gregarius: L0C25_22790
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Entry
L0C25_22790 CDS
T09807
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgrg
Solicola gregarius
Pathway
sgrg03030
DNA replication
sgrg03410
Base excision repair
sgrg03420
Nucleotide excision repair
sgrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0C25_22790 (polA)
03410 Base excision repair
L0C25_22790 (polA)
03420 Nucleotide excision repair
L0C25_22790 (polA)
03440 Homologous recombination
L0C25_22790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrg03032
]
L0C25_22790 (polA)
03400 DNA repair and recombination proteins [BR:
sgrg03400
]
L0C25_22790 (polA)
Enzymes [BR:
sgrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0C25_22790 (polA)
DNA replication proteins [BR:
sgrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L0C25_22790 (polA)
DNA repair and recombination proteins [BR:
sgrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L0C25_22790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0C25_22790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH
Fibrillarin_2
Motif
Other DBs
NCBI-ProteinID:
UYM05303
UniProt:
A0AA46TIU4
LinkDB
All DBs
Position
complement(4682484..4685162)
Genome browser
AA seq
892 aa
AA seq
DB search
MDTAAANRLLLIDGHSIAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDEEPTHV
AVAFDVSRKTFRLEEYAEYKGNRSASPPEFKGQVSLVKEVLDALAISSLEREGYEADDII
GTLATQAEAAGFDVLICTGDRDALQLVTDHTTVLYPRKGVSDLARMTPEAVQEKYGVAPE
RYPEVAALVGETSDNLPGVPGVGPKTAAKWLAKFDGLDGIVRDVDQVPGKAGESLREHLS
DVIRNRRINALVRDLDLPLGPDELALKTWDRDAIHEVFDGLEFRVLRDRLFATLSSDEPV
SDEGFDIDATIPVAGALGEWLDAHARDGARAGLHVDGVWGAGAGDVRSVAIATAKGPAAW
VDLAELGPDDERALAGWLGDADVSKALHDAKGPMLALRARGIELRGVEHDTALAAYLVKP
DQRSYDLADLTLRYLRRELADDSADAGQLTLDTGEQAGADAAMVRARATLELAAELDTDL
ERHGAAELLRDLELPLLSVLAEMERTGIAVDDADLEQLESQFATRVRDAADEAYAVIGKQ
INLGSPKQLQVVLFDELGMPKTKRTKTGYTTDADALQSLFEKTEHPFLSHLLTHRDVSRL
RQTVEGLRKTVASDSRIHTTYNQTIAATGRLSSTDPNLQNIPIRTESGRRIRGAFCVGPG
YDDLLTADYSQIEMRIMAHVSEDAGLIAAFNSGEDFHTAMASRVFAVDADEITPHMRSRI
KAMNYGLAYGLSAYGLSQQLGIETGEAQGLMEEYFVRFGGVRDYLHGVVDEARQTGFTET
ILGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADIIKVAMLGVHGALAESDLTSRML
LQVHDELVLEVAAGEHERVEALVREQMASAADLAVPLDVSVGFGRTWQDAAH
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
gtggacaccgctgcagccaaccgcctcctgctcatcgacggccactcgatcgcgtaccgc
gcgttcttcgcgctcccggtcgagaacttctcgaccaccacgggccagccgaccaacgcc
gtgtacgggttcacgtcgatgctcatcaacgtgctgcgcgacgaggagccgacccacgtc
gcggtcgcgttcgacgtctcccgcaagacgttccggctggaggagtacgccgagtacaaa
ggcaaccgctcggcgtcgccgccggagttcaagggtcaggtctcgctcgtcaaggaggtc
ctcgacgcgctcgcgatctccagcctggagcgggagggctacgaggccgacgacatcatc
ggcacgctcgcgacacaggcggaggcggccggctttgacgtgctgatctgcaccggcgac
cgcgatgccctgcagctcgtcaccgaccacaccaccgtgctctacccccgcaagggtgtc
tccgacctggcgcggatgacgccggaggcggtgcaggagaagtacggagtcgcaccggag
cggtaccccgaggtcgcggcgctggtcggtgagaccagcgacaacctgccgggcgtaccc
ggtgtcggtccgaagacggccgccaagtggctggcgaagttcgacgggctcgacggcatc
gtgcgcgacgtcgaccaggtgccgggcaaggcgggggagtcgctgcgcgaacacctctcc
gacgtcatccgcaaccgccgcatcaacgcgctcgtacgcgacctcgacctgccgctcggc
ccggacgaactcgcgctgaagacgtgggatcgcgacgccatccacgaggtgttcgacggc
ctggagttccgggtgctgcgcgaccggctgttcgcgacgctgtcgtccgacgagccggtc
tccgacgagggcttcgacatcgacgcgacgatcccggtggcgggtgcgctgggcgagtgg
ctcgacgcccacgcccgcgacggcgcgcgggccggactccacgtcgacggcgtctggggc
gctggagcgggcgacgtgcggtcggtcgcgatcgcgaccgcgaaggggccggcggcctgg
gtcgacctcgccgagctcggcccggacgacgagcgcgctctcgcgggctggctgggcgac
gcggacgtgtcgaaggcgctgcacgacgccaagggtccgatgctcgcgctgcgggctcgc
ggcatcgagctgcgtggcgtcgagcacgacaccgcgctcgccgcgtacctcgtcaagccc
gaccagcgttcgtacgacctcgccgacctgaccctgcgctacctgcgccgcgagctggcc
gatgactccgcggacgccggccagctgacgctcgacaccggcgagcaggccggcgcggac
gcggcgatggtacgtgcgcgggcgacgctcgagctcgcggccgagctcgacaccgatctc
gagcggcacggcgccgccgagctgctccgcgacctcgagctgccgctgctcagcgtgctg
gccgagatggagcgcacgggcatcgccgtcgacgacgccgacctcgagcagctcgagtcg
cagttcgccacgcgggtacgcgacgcggccgacgaggcgtacgcggtgatcggcaagcag
atcaacctcggctcgccgaagcagctgcaggtggtgctgttcgacgagctcggcatgccg
aagaccaagcgtacgaagaccggttacaccaccgacgccgacgcattgcagtcgttgttc
gagaagaccgagcacccgttcctctcgcacctgctgacacatcgcgacgtcagccgacta
cgccagaccgtcgaaggcctccgcaagaccgtggccagcgacagccggatccacacgacg
tacaaccagacgatcgcggcgacgggccgactgagctcgaccgacccgaacctgcagaac
atcccgatccgcaccgagtccggccggcggatccgtggcgcgttctgtgtcggtcccggc
tacgacgacctgctgaccgccgactacagccagatcgagatgcggatcatggcgcacgtc
tcggaggacgccggcctgatcgcggcgttcaactccggcgaagacttccacacggcgatg
gcatcgcgggtcttcgcggtcgatgccgacgagatcaccccccatatgcgcagccggatc
aaggcgatgaactacgggctcgcgtacgggctctcggcctacggcctgagtcagcagctc
ggcatcgagaccggcgaggcgcagggcctgatggaggagtacttcgtgcgcttcggcggc
gtacgcgactacctgcacggtgtcgtcgacgaggcacgccagaccgggttcaccgagacc
atcctcggccggcgacgctacctaccggacctcaccagcgacaaccggcagcgccgcgag
atggcggagcggatggccctcaacgcaccgatccagggctcggcggccgacatcatcaag
gttgccatgctcggcgtacacggggcgctcgcggagtccgacctgacgtcacggatgctg
ctgcaggtccacgacgagctcgtgctcgaggtcgccgccggcgagcatgagcgggtcgag
gcgctcgtccgcgagcagatggcgtcggccgccgacctggcggtcccgctcgatgtctcg
gtcggcttcgggcgcacctggcaggacgccgcccactga
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