Solicola gregarius: L0C25_23340
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Entry
L0C25_23340 CDS
T09807
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgrg
Solicola gregarius
Pathway
sgrg03030
DNA replication
sgrg03430
Mismatch repair
sgrg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L0C25_23340
03430 Mismatch repair
L0C25_23340
03440 Homologous recombination
L0C25_23340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrg03032
]
L0C25_23340
03400 DNA repair and recombination proteins [BR:
sgrg03400
]
L0C25_23340
Enzymes [BR:
sgrg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L0C25_23340
DNA replication proteins [BR:
sgrg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L0C25_23340
DNA repair and recombination proteins [BR:
sgrg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L0C25_23340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
DEDDh_C
UVR
TMV_coat
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
UYM05408
UniProt:
A0AA46TJ23
LinkDB
All DBs
Position
4799606..4801360
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AA seq
584 aa
AA seq
DB search
MTALRAVQGTFDELGTALRDATFCVVDLETTGGSASAGSEITEFGAVKVRAGEVVSEFQT
LVRPHTSIPSFIAVLTGINDSMVASAPRIDTALPSFLEFAKGCVLVAHNAPFDVGFLRHF
AGELGHTWPGFDVIDTAKLARRVLTRDEAPNCKLSTLARIFHASTTPNHRALEDARATVD
VLHSLIARLGNVGVHTVEELSTFSSQVSTTQRRKRYLAEGLPHSPGVYLFRDAQDSVLYV
GTSKDIGARVRSYFTSSETRSRMGEMVGLAERVEAIECATTLEAQVRELRLIAAHKPRYN
KRSRFPERAIWVKLTREPWPRLSLVRSIGDDGADYIGPFGSRRTADSAVAALHEAFGIRQ
CTGRMPKVPSRSPCALAEMGVCMSPCDQSVSSVDYQHEVERVREAMLRDPAEVIAALDLK
MARLSDQTRFEDAQVQRDRLRSFLRATARTQRLTALTTCRDLVAARRGDDGRWVVHVVRY
GRLCAAGVIPDGADAREWVERLRIGAETVLPGFGPAPAASTEETERVLSWLEGEGTRLIE
VDGDWMCPVRGATRHLATYDAVEATSVVPFDERRMPRTVHQPTR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcttcgagccgtgcagggcacgttcgacgagctcggtacggccttgcgcgac
gcgacgttctgcgtcgtcgacctcgagacgacgggcggctccgcgtcggccgggtcggag
atcaccgagttcggtgcggtcaaggtgcgcgccggcgaggtggtctcggagttccagacc
ctcgtacgtccgcacacctcgattccctcgttcatcgcggtgctcaccggcatcaacgac
tcgatggtcgcgtccgcgccccggatcgacacggcgcttccctcgttcctcgagttcgcc
aaggggtgcgtgctggtggcccacaacgcgccgttcgatgtcggcttcctccgacacttc
gccggtgagctcggtcatacctggccgggtttcgacgtcatcgacacggcgaagctcgcg
cggcgcgtcctcacccgtgacgaggcgcccaactgcaagctgtcgacgctcgcccggatc
ttccacgcgtcaacgacgcccaatcaccgcgccctcgaagacgcccgcgcgacggtcgac
gtcctgcactcgctgatcgcacgactcggcaacgtcggcgtacacacggtcgaggagctc
tcgaccttcagcagccaggtgagcacaacccaacgccgtaagcgctacctcgccgagggc
ctgccccactcaccgggtgtgtacctcttccgcgacgcccaggactccgtgctctacgtc
ggcacgtccaaggacatcggcgcgcgcgttcgctcgtacttcacctcgagcgagacccgc
agccggatgggcgagatggtggggctcgccgagcgggtcgaggcgatcgagtgtgcgacg
acgctcgaggcacaggtacgcgagctgcgcctgattgcagcccacaaaccccgctacaac
aagcgttcgcgtttcccggagcgcgcgatttgggtcaagctcacccgcgagccgtggccg
cggttgtcgctcgtgcggtcgatcggcgacgacggggccgactacatcggcccgttcggc
agccggcgcaccgccgacagcgccgtcgccgcactgcacgaggcgttcggcatccggcag
tgcaccggtcggatgcccaaggtgccgagccgatcgccgtgcgccctcgccgagatgggc
gtgtgcatgtcgccgtgtgaccagtccgtctcatcggtcgactaccaacacgaggtcgag
cgcgtacgtgaagccatgctgcgcgacccggccgaggtgatcgcggcgctcgatctcaag
atggcccggctgtccgaccagacccgcttcgaggatgcacaggtccaacgcgaccggctc
cgttcgttcctccgggcgacggcacgcacccaacgcctgacggcactcaccacgtgccgc
gatctcgtcgctgcccgccgcggcgatgacggccggtgggtggtgcatgtcgtccgctac
ggccggttgtgcgccgcgggcgtcatcccggacggcgcagacgcgcgcgagtgggtcgag
cgcctccgcatcggggccgagaccgtgctccccggtttcgggccggcaccggcggcctcg
accgaggagaccgaacgtgtcctcagctggctcgagggcgagggcacccggctgatcgag
gtcgacggcgactggatgtgtccggtacgcggggcgactcgccatctcgcgacgtacgac
gccgtcgaggccacctcggtcgtcccgttcgacgagcgtcggatgccgcgcaccgtgcac
cagccgaccagatga
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