Serratia grimesii: SGBXF1_00104
Help
Entry
SGBXF1_00104 CDS
T09948
Symbol
xylR
Name
(GenBank) Xylose operon regulatory protein
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgri03000
]
SGBXF1_00104 (xylR)
Transcription factors [BR:
sgri03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SGBXF1_00104 (xylR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PBP1_XylR
Peripla_BP_3
HTH_AraC
HTH_18
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
SMZ54530
LinkDB
All DBs
Position
1:116802..117980
Genome browser
AA seq
392 aa
AA seq
DB search
MFDKRYRITLLFNANKVYDRQVVEGVGEYLQASQCDWDIFIEEDFRCRIDNIKDWLGDGV
IADFDDVEIERLLQNVTVPIVGVGGSYHRDDEYPPVHYIATDNHALVETAFTHLKEKGIN
RFAFYGLPDEGGKQWAKEREYAFQQLVAAEQYQGVIYQGMATSPDNWQYAQNRLADWVQT
LPQQTGIIAVTDARARHLLQVCEHLDIAVPEKLCVIGIDNEELTRYLSRVALSSVAQGTR
QMGYRAAKLLHQLLNGQVLPLQRILVPPIKVIERRSTDFRSLRDPAVIHAMHYIRHHACQ
GIKVEQVLDAVGISRSNLEKRFKDELNQTIHHVIHEEKLDRSRNLLTATSLPIAEISQMC
GYPSLQYFYSVFKKGYDMTPKDYRERYGEVGY
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgttcgataagcgctaccgaattacgctgttattcaatgcgaacaaagtgtacgaccgg
caggtggtcgagggggttggcgagtatttacaggcttcacaatgtgactgggacatcttt
atcgaagaggatttccgctgccgtatcgacaatatcaaagactggctgggtgatggggtc
attgctgatttcgacgatgtagagattgaacggctactgcaaaatgtcactgtgcctatc
gtcggcgtgggcggctcttaccaccgagatgatgaatatccaccggtgcattacattgcc
actgacaaccacgcgttagtcgagacggcattcacccatctgaaagaaaaggggattaat
cgttttgctttctacggattgcctgatgaaggtggaaagcaatgggcgaaggagcgtgaa
tatgccttccagcaattggtggcggcggagcaataccaaggggtgatctatcaggggatg
gccacttctccagacaattggcaatacgcacaaaaccggttggcggactgggtgcagacc
ctgccacagcagaccggcatcattgcggtgaccgatgcacgggcgcgccatctgttgcag
gtgtgcgaacatctggatatcgctgtgccggaaaagctgtgtgtgatcggtatcgacaat
gaagagctgacgcgttacctgtcgcgggtggcgctgtcttcggttgcgcagggtacccgc
caaatgggctatcgtgccgccaaattgctgcaccaattgctcaatgggcaggtgttgccg
ttgcagcgtattttggttccaccaataaaagtcattgagcggcgttctacagattttcgt
tcattgcgtgatcctgcggtgatccacgcgatgcattacatacgccaccatgcttgtcag
gggattaaagtcgaacaagtgctggatgccgtgggcatatcgcggtctaacctggaaaag
cgctttaaggacgaactgaaccagacaatccaccatgtgattcacgaagagaagctcgac
cgttcacgtaatttactcacggcgacgtcattaccgattgccgagatttcacagatgtgt
ggctacccatcgctgcaatatttttattcggtattcaagaaaggctatgacatgacaccc
aaagactatcgcgaacgctacggcgaggtcgggtattag
DBGET
integrated database retrieval system
