Serratia grimesii: SGBXF1_00279
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Entry
SGBXF1_00279 CDS
T09948
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sgri
Serratia grimesii
Pathway
sgri00071
Fatty acid degradation
sgri00280
Valine, leucine and isoleucine degradation
sgri00310
Lysine degradation
sgri00362
Benzoate degradation
sgri00380
Tryptophan metabolism
sgri00410
beta-Alanine metabolism
sgri00640
Propanoate metabolism
sgri00650
Butanoate metabolism
sgri00907
Pinene, camphor and geraniol degradation
sgri00930
Caprolactam degradation
sgri01100
Metabolic pathways
sgri01110
Biosynthesis of secondary metabolites
sgri01120
Microbial metabolism in diverse environments
sgri01200
Carbon metabolism
sgri01212
Fatty acid metabolism
Module
sgri_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SGBXF1_00279 (fadB)
00650 Butanoate metabolism
SGBXF1_00279 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SGBXF1_00279 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SGBXF1_00279 (fadB)
00310 Lysine degradation
SGBXF1_00279 (fadB)
00380 Tryptophan metabolism
SGBXF1_00279 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SGBXF1_00279 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SGBXF1_00279 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SGBXF1_00279 (fadB)
00930 Caprolactam degradation
SGBXF1_00279 (fadB)
Enzymes [BR:
sgri01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SGBXF1_00279 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SGBXF1_00279 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SGBXF1_00279 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SGBXF1_00279 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
SMZ54699
LinkDB
All DBs
Position
1:complement(309950..312139)
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AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTRTVASLGEALTVLEKQTELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLQEWLVFANSIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDISAKDALK
VGLVDAVVAPEKLVEAALKMLQQAIEGKLDWRAYRQPKLEPLKLSPIEAAMSFTTAKGMV
MQTAGKHYPAPMTAVKTIEAAAKLGRDEALKLETASFVPLARSKEARALVGIFLNDQFVK
GQAKKLAKNVEAPKQAAVLGSGIMGGGIAYQSALKGVPVVMKDINDKSLTLGMNEAAKLL
NKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVEGLIGE
DTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDSTIAAVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGVDFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDSKGKP
RKDNDEQTDTLLAEVSQPRQTISDEEIIARMMIPMINEVVRCLEENIIASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAERNESYYPVAAPL
SDVSTGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgacaacggcatcgccgagctg
gtgtttaatgccccaggttctgtaaacaagctggatacccgcactgttgccagcctgggt
gaagcactcacggtgttggaaaagcagaccgagttgaaaggcctgctgctgcgttccacc
aaggccgcatttattgtcggtgctgatatcaccgagttcctttcgctgtttgctgcaccg
gctgaaaagctgcaggaatggctggtctttgccaatagcatctttaaccgcttggaagat
ttgccggtaccgaccatttcggccattaacggctatgcgctcggcggtggttgtgaatgc
attctggcgaccgatttccgcgttgcctctccagatgcgcgcatcggcctgccggaaacc
aaactgggcattatgccgggcttcggcggctctgttcgtttgccacgcctgctgggtaac
gacagtgcattggagatcatcgccgccggtaaagacatcagtgctaaagatgcactgaag
gtcggtttggtagacgccgtcgttgcaccagaaaagttggtggaagccgcgctgaaaatg
ctgcaacaggcgattgaaggcaaactggactggcgcgcctatcgccagccaaaactcgag
ccattaaaactcagcccaattgaagcggccatgagcttcaccaccgccaaaggcatggtg
atgcaaaccgccggaaaacattatccggcgccaatgaccgcagtcaaaaccattgaggcc
gcagccaagctgggccgtgatgaagcattgaaactggaaaccgccagctttgtgccattg
gcccgctccaaagaggctcgcgcgctggtcggcatcttccttaatgaccagtttgtgaaa
ggtcaggcgaagaaactcgcgaagaacgttgaagcaccaaagcaagcagcggtgttgggt
tccggtatcatgggtggcggtatcgcctaccagtctgcgctgaaaggcgtaccggttgtc
atgaaagacattaacgacaaatccctgacgctcggcatgaatgaagccgccaagctgctt
aacaagcagttggagcgtggcaagctagacggcatgaagatggcgcaagtgttgtcgacc
attcaaccgactctggattatgccggtatcgaacgtgcgcaagtaatcgtcgaagccgtt
gtcgagaatccaaaggttaaggcagcagtactgtccgaagtggaaggcttgatcggcgaa
gatactgtactggcgtcaaatacgtcgaccattccgattaatcacttggcaaaatcattg
aagcgcccgcaaaacttctgcggcatgcacttctttaacccagtacatcgcatgccgctg
gtggaaatcatccgtggtgaacaaaccagcgatagcaccattgccgctgtggtggcttac
gccagccgcatgggcaaaacgccgattgtagtaaatgactgcccagggttcttcgtcaac
cgtgtgttgttcccatattttgccggtttcagcatgctgctgcgcgacggggtggacttc
cgtcagatcgacaaagtgatggagaagcagtttggctggccaatgggccccgcttacctg
ctcgacgtcgtcggtatcgatactgcacaccacgctcaagcagtgatggcggcaggtttc
ccagagcgcatgggcaaagattatcgcgacgccatcgatgtaatgtttgataaccagcgt
ttcggtcagaaaaaccaactgggcttctatcgttacagccaggacagcaaaggcaaaccg
cgtaaagacaacgatgagcagaccgacacgttactggctgaagtcagccaaccgcgccaa
accatcagcgacgaagaaatcattgcccgtatgatgatcccaatgatcaacgaagtcgta
cgttgtctggaagaaaacattatcgccagcccggccgaagcggatatggcgttggtctat
ggcatcggtttccctccgttccacggcggggcgttccgttacctggatacgcttggcact
gccaattatgtcgaactggcccagcgttatgcgcatctcggtgccctgtatcaggtacct
gccggtctgcgcgccaaagctgaacgtaatgaaagctactacccggtggcagcgccgctg
tccgatgtctccactggccaaccggcatga
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