Serratia grimesii: SGBXF1_00363
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Entry
SGBXF1_00363 CDS
T09948
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sgri
Serratia grimesii
Pathway
sgri03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SGBXF1_00363 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgri03019
]
SGBXF1_00363 (orn)
03009 Ribosome biogenesis [BR:
sgri03009
]
SGBXF1_00363 (orn)
Messenger RNA biogenesis [BR:
sgri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SGBXF1_00363 (orn)
Ribosome biogenesis [BR:
sgri03009
]
Eukaryotic type
Pre-60S particles
RNases
SGBXF1_00363 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SMZ54770
LinkDB
All DBs
Position
1:397615..398160
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AA seq
181 aa
AA seq
DB search
MTGNENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVIAVHQSDEQLGLMDD
WNVRTHTGSGLVERVKASQFDDHAAELATIAFLQQWVPAGKSPICGNSVGQDRRFLFRYM
PELEAYFHYRYLDVSTLKELARRWKPEILSGFKKQGTHQAMDDIRESVGELAYYREHFIQ
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaaacgaaaataacctgatttggatcgatctggaaatgactgggttggatcct
gagcgcgatcgcattatcgagatcgctacattggtcactgacgccaatctgaacatcctt
gcagaagggccggtaatcgccgtacatcaatctgatgaacagctagggctgatggatgac
tggaacgtgcgcactcatactggcagcgggctggtggagcgtgtgaaggccagccagttc
gacgaccatgccgctgagctggctaccattgcctttttgcagcagtgggtgcctgcgggc
aaatcaccgatttgtggcaacagtgttggccaggaccgtcgcttcctgttccgttatatg
ccagagctggaggcttacttccattaccgctatctggatgtcagcacgctgaaagagttg
gcgcgtcgttggaagccggaaattctgagcggttttaaaaagcaagggactcatcaggcg
atggatgacatccgtgaatcggtgggtgagttggcctattaccgtgagcatttcatccag
ttgtaa
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