Serratia grimesii: SGBXF1_00435
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Entry
SGBXF1_00435 CDS
T09948
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgri03016
]
SGBXF1_00435 (truB)
Enzymes [BR:
sgri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SGBXF1_00435 (truB)
Transfer RNA biogenesis [BR:
sgri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SGBXF1_00435 (truB)
Prokaryotic type
SGBXF1_00435 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
SMZ54837
LinkDB
All DBs
Position
1:467120..468064
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKSQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVNFTQAQLDIALESFRGDIK
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPTERMVTLEQLNALLEQAQAQDIAPAELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIADD
GRVAPRRLVVEYFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggtgtcctgttgctggacaaatcg
cagggtttgtcatccaacgacgccctgcaaaaagtaaaacgcctctataacgctaaccgc
gcgggccacactggcgcgctcgatccgctggcgaccggcatgttgccaatttgcctcggt
gaagcgaccaagttttcacagttcctgctcgactccgataaacgttatcgtgttatcgcc
cgtcttggtcagcgtacggatacctcggatgccgatggtcagatagtgcaagagcggccg
gtgaatttcacccaggcacagctcgacatagcactggaaagcttccgtggcgatatcaag
caagtaccttcgatgtactcggcgctgaagtaccaaggcaaaaaactctatgagtatgca
cgccagggtatcgaagtcccgcgtgaagcacgcagcattaccgtttatgaattgcagttt
attcgctgggaaggggatgagctggagctggaaattcattgttcaaaaggcacttacatc
cgcaccatcaccgatgacctcggtgagctgttgggttgtggtgcacatgtgatctacctg
cgtcgtctgcaagtggcgacctacccgaccgaacgcatggtcacgctggagcagctgaac
gcattgctggagcaggcgcaggcgcaggacattgcgccggcagaactgctcgatccactg
ctgatgccgatggacagtccggtggagaactacccggaagtgaatctgctacccgttgtt
gcgggttacgttaagcaggggcagccagtgcaggttgccggtgcaccggcctcgggcatg
gtacggatcacggaaggtgaagagcgtaaatttatcggcgtgggtgacattgccgatgat
ggtcgtgtggcaccgcgccgcctggtagtcgaatatttcgactga
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integrated database retrieval system
