Serratia grimesii: SGBXF1_00965
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Entry
SGBXF1_00965 CDS
T09948
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgri03400
]
SGBXF1_00965 (sbcC)
DNA repair and recombination proteins [BR:
sgri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SGBXF1_00965 (sbcC)
Archaeal homologous recombinant proteins
SGBXF1_00965 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
cobW
AAA_21
AAA_14
Gmx_para_CXXCG
TsaE
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
SMZ55353
LinkDB
All DBs
Position
1:complement(1039109..1042360)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLDLTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQAKIELDALHQRASGIELLNDEQRQQLENQLVELGAQENTLSGQARQ
QQQALNWLQFWLQTQQKQQEYQRQLNAVELEQTAAEPQLQQLARSEPAEKLRPRLNERNR
CRSDQQALQQQITLLTQQQTQQLAQMEPLHQAMEKARTQLQAHVEQQQTQQRLIDEQIVP
LDNQIAQLQKTQAERQHAFDTAVQQCAKQKADLEQLDIQRTQLTAQAGQHQEKLNVLTAA
LTTQQQQQHTLEMQAPLAALRQRQTELADLRPVRQQLFSLSSLSQQIVKRLTQQRQELRA
GQSELTQLEPQLELARQQYKQQKAHQTDVEKTVELEKRIVGLEAERARLQPGEPCPLCGS
NTHPAVEQYQAVKLSETEKRLEEMKIQTEALQKKGVELRARYDSLQQQLQRQQQTIAHDE
QQLAEHLQNWQRLTAPLAFDFGLQDTERLHDWLNDCEQQEREGQQRLTQHEQAALAVQQA
KDALAVLQVQQQQAQQEKARLDERFTLLEKSYADAQLQQQHLYQQWQQGQNTLGEQRAQR
LALFGEQQVVQVREQLRAQQTAFEQASHQAAEQWQKAQEQRDRLSGQLAGLQQQLLQQTE
RLQQAEQDWLQALTASEFSDEAAFNAALLDDAQRQQLQHCKEQLQRRHVEARALLAQAVD
SLQQHQQQRPEGLDETQADPHILSQSLETLAQQLKTLQLQQGEVRNQLESDAMRRINQQS
LFAQISQSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELLVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLESQF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgagattaaaaaacctcaactcactacagggtgaatggaagata
gacttcaccgccgagccctttgccagcaatgggctgttcgccatcaccggccccaccggt
gcaggtaaaactacccttttggacgccatctgtctggcgctgtaccaccaaacaccgcgc
ctcaacgtcacaccgagccaaaacgaactgatgacacgtcacacagccgagtcgctggca
gaggtcgagtttgaggttaagggcgtcggctaccgcgccttctggagccagcgacgcgcc
aaaaatgcgccagacggtaatctgcaggcacctaaagtagagctggcactgcgtgaggat
ggcaagatcctggcggacaaagtacgcgacaagctggatcttaccgccgctattaccggg
ctggatttcgggcgctttaccaaatcgatgatgctttctcagggccagttcgccgctttc
ctcaatgctgacgccaatgaccgtgccgagctactggaagagttaaccggcaccgagatc
tacggtcagctttctgagcgggttttcgaacaacacaaacaggccaagatcgaactggac
gcgctgcatcaacgtgccagtggtattgaactgctgaatgatgaacaacgacaacaactg
gaaaaccagttagttgaattaggggcacaagaaaacaccctcagcgggcaagcccgccag
cagcagcaagcgttgaactggttgcagttttggctacaaacgcagcaaaaacagcaggaa
tatcaacgccagctgaacgctgtggagctggagcaaaccgcagcagaaccgcaactacag
caactggcacgcagcgaaccggcagaaaaactgcggccacggcttaacgaacgtaaccgc
tgccgcagcgatcagcaggcattgcaacaacaaatcaccctgttaacacagcagcagacg
caacagctggctcaaatggaaccgttgcatcaggcgatggaaaaagcgcgtacccagttg
caagcgcatgtcgaacagcaacaaacacagcagcggctgattgacgagcaaatcgttcca
cttgataaccagatcgcccagttgcaaaaaacacaggcggaacggcaacacgcgttcgat
accgcggtacagcaatgtgcgaaacaaaaagcggacctggaacaactcgacattcagcgt
acccagttgaccgcacaggccgggcaacaccaggaaaagcttaacgttctcactgccgca
ctgacgacgcagcaacaacagcaacatacgctggaaatgcaggcacctctggcagcactg
cgccagcgtcagactgagttggccgatctgcgccccgtgcggcaacagcttttcagcctg
tcatcactgtcacaacaaatcgtcaaacggctgacacagcaacggcaggaactacgtgca
ggccagagcgaactgacccagttggaaccacagctggaactcgctcgtcaacaatataaa
caacagaaagcccatcaaaccgacgttgaaaaaacagtagagctggaaaaacggatcgtg
gggttggaagccgagcgagcgcgtctgcaacccggtgagccttgcccattgtgcggctca
aatacgcatccggcagttgagcaataccaagcggtaaagctatcagaaaccgaaaaacgt
ctggaagaaatgaaaatccagaccgaggcattacaaaagaaaggcgtcgaattacgggca
cgttacgatagcctgcaacaacagttacagcgccaacagcagaccattgcacacgatgaa
cagcaattagctgagcatctgcaaaattggcaacgtttgacggcgccgctggcatttgat
tttggcttgcaggataccgaacgtctgcatgactggttgaacgactgcgaacaacaagag
cgcgaaggccagcagcggctgacgcagcacgaacaggcggcactggcggtgcagcaagcc
aaggatgcgctggccgtactacaggtgcagcagcagcaagcgcaacaggaaaaagcgcgc
ctggatgagcgtttcaccttactggagaaaagctacgccgacgctcaattgcagcaacaa
cacttgtaccaacagtggcaacaaggccaaaacacgcttggtgaacagcgtgcgcaacga
ctggcattgtttggcgaacaacaggtcgtacaagttcgcgagcagctacgcgctcaacaa
acggcctttgagcaggccagccatcaggcagcagaacagtggcaaaaggcacaggaacaa
cgcgatcgtctgagcggccaacttgccggattgcagcaacagctattgcaacaaaccgag
cgactgcaacaggcagaacaagactggttgcaggcactcaccgccagtgaattcagtgac
gaagccgcgttcaatgccgcattgctggatgatgcccaacgccaacagttgcaacactgc
aaagaacaattacaacggcgacacgttgaagcccgtgcactattggcacaggccgttgac
agcctgcaacaacaccaacaacagcgcccagaagggctggatgaaactcaggccgatcct
cacatcctgagccagagcctggaaacactggcacaacagttaaaaaccttgcagctacaa
cagggtgaagtgcgtaatcagttagaaagtgacgccatgcgtcgcatcaatcaacagtcg
ctgtttgcgcaaatcagccaaagccagcagcagtacgacgactggagctatctcaatcag
ttaattggctccaaagagggtgataaattccgtaagtttgctcagggattaacccttgac
cacctggtatatctggccaataaccagcttggccgactgcatgggcgctatttgctgcaa
cgtaaaaccagcgacgcgctggaactgctggtggtggatacctggcaagcagatgcatta
cgcgacactcgtacactatccggcggcgaaagtttcctggtgagcctggcgctggcgctg
gcgctgtccgatctcgtcagccacaagaccagtatcgattcgctgttcctcgacgagggt
ttcggcacgctggatgcagaaaccctcgatactgcgctggatgccttagacagcctgaat
gcctctgggaaaaccattggcgtgatcagtcacgttgaagcaatgaaagaacgtattccg
gtgcagattaaagtgaaaaaggttaacgggcttggcatcagccggctggaatcgcagttc
cgattagaataa
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integrated database retrieval system
