Serratia grimesii: SGBXF1_01601
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Entry
SGBXF1_01601 CDS
T09948
Symbol
metC_1
Name
(GenBank) Cystathionine beta-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
sgri
Serratia grimesii
Pathway
sgri00260
Glycine, serine and threonine metabolism
sgri00270
Cysteine and methionine metabolism
sgri00450
Selenocompound metabolism
sgri00670
One carbon pool by folate
sgri01100
Metabolic pathways
sgri01110
Biosynthesis of secondary metabolites
sgri01230
Biosynthesis of amino acids
Module
sgri_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SGBXF1_01601 (metC_1)
00270 Cysteine and methionine metabolism
SGBXF1_01601 (metC_1)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
SGBXF1_01601 (metC_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
SGBXF1_01601 (metC_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgri04147
]
SGBXF1_01601 (metC_1)
Enzymes [BR:
sgri01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
SGBXF1_01601 (metC_1)
Exosome [BR:
sgri04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
SGBXF1_01601 (metC_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
DegT_DnrJ_EryC1
Aminotran_5
fvmX3
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
SMZ55977
LinkDB
All DBs
Position
1:complement(1715747..1716892)
Genome browser
AA seq
381 aa
AA seq
DB search
MAKFDTLTVHAGYTPDATGAVMPAIYATSTYAQPAPGEHTGYEYSRSANPTRTALESAIA
ELEGGSRGYAFASGLAACSTVLELLDQGSHLVAVDDLYGGTYRLLEKVRSRTAGLRVTYV
SPADIAALEQAIEPDTKMIWVETPTNPLLKLADLSAIATIAKKHGLISVADNTFASPYIQ
RPLDLGFDVVVHSATKYLNGHSDVVAGVAAVGDNPELAEQLGFLQNAVGGILDPFSSFLT
LRGIRTLALRMERHSQSALHIAQWLENQPQVEEVYYPGLPSHPQHALATKQMRSFGGMIS
VRLKGDDAFARRVIKRSHLFTLAESLGGVESLISQPFSMTHASIPLEQRLKTGITPQLLR
LSVGIEDTEDLIADLQQALAE
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtttgatacgttgaccgttcatgccggctacacgccggacgctactggggca
gtaatgcctgctatttatgccacatccacctatgcccagccagcaccgggtgagcatact
ggttacgagtattcacgcagcgccaacccaacgcgtaccgcattagaaagcgccattgct
gaactggaaggcggcagccgcggttatgcctttgcttccggcctggctgcctgctcaacg
gtattggaattgctcgatcagggtagccatttagtggctgttgacgacttatacggcggt
acctaccgcttactggaaaaagtacgtagccgtactgccggcttgcgcgttacctatgtt
tccccagcagacattgctgccctggaacaagccattgaaccagatacaaaaatgatctgg
gtggaaacgccgaccaacccgctactgaaactggccgatctgagcgccatcgctaccatc
gccaaaaagcacggtttgatcagcgtagcagacaacaccttcgcctcaccttacattcag
cgcccgctggatcttggttttgatgtcgtggtgcattctgcaactaaatacctcaacggc
cattccgatgtggttgcaggggttgcggccgtaggggataacccagaattggccgaacag
cttggctttttgcagaacgcggtaggcggcattcttgatccattcagcagcttcctgacg
ctgcgcggcatccgtacgctggcactacgtatggaacgccacagccaaagcgccttgcat
atcgctcagtggttggaaaaccagccgcaggtggaagaagtctactacccgggcctgccg
agccacccgcagcatgcactggcaacaaaacagatgcgcagttttggcggtatgatttcg
gtacgattgaaaggtgacgatgccttcgcacgtcgggtcattaagcgctcacacctgttc
acgctggcagaaagcttggggggtgtggaaagcctgatcagtcaacctttcagcatgacc
catgcgtcgatcccattggagcaacgcttgaaaaccggcatcacaccacagttgctgcgt
ttgtcggtgggcattgaagatacggaagatctgattgctgatctgcaacaggctctggcg
gagtaa
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