Serratia grimesii: SGBXF1_01830
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Entry
SGBXF1_01830 CDS
T09948
Symbol
cho
Name
(GenBank) Excinuclease cho
KO
K05984
excinuclease Cho [EC:3.1.25.-]
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgri03400
]
SGBXF1_01830 (cho)
DNA repair and recombination proteins [BR:
sgri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGBXF1_01830 (cho)
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Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
DUF6182
Motif
Other DBs
NCBI-ProteinID:
SMZ56204
LinkDB
All DBs
Position
1:complement(1939025..1939849)
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AA seq
274 aa
AA seq
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MYQYPEHLTEEVANLPQTCGVYFFHGDSDAHPLYIGKSVNIRRRVQSHLRNPREARLLAA
TRRITCIETVGEIGALLLESSMVKQQSPLYNKRLRKIRRLCALQVQDSQTRIVYSDALDF
SRTPNLYGLFLRRSAAVDFLLDIADQERLCLTHLDIEKGRPGQPCFRHQLGKCAGVCCGK
ETSQAHQTRLLSALEQAQVRHWPFPGRIAIEERQGQLTAFHIISNWFYLGTAPSLHEAEK
LSFPADEFDRDCYRILCRRLFHESREHIHLIDKV
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgtatcaataccctgaacatctgaccgaagaagtcgccaatctgccgcaaacctgtggc
gtctatttctttcacggggacagcgacgctcatcctctatacataggtaagagtgtcaat
attcgccgccgtgttcagtctcatctgcgtaatccgcgtgaagcgcgattacttgccgct
acccgtcgtataacctgcatcgagacagtgggtgagattggggcgctactgcttgaatca
tccatggttaaacagcaaagtcctctttacaacaagcggctgcgtaaaattcggcgactt
tgtgcgttgcaagtacaggactcccagacgcgtatcgtttacagtgatgcgctggacttt
tcccgaacgccgaacttatacggtctgtttctgcgacgctcggcggccgtcgactttctg
ctcgatattgccgatcaggaacgactctgtctgactcacctggatattgaaaaagggcgc
cccgggcaaccctgctttcgccaccaattaggcaagtgcgcaggagtatgctgcgggaag
gaaacctcgcaagcccaccagaccagactgctcagtgccctggagcaggcccaggtacga
cactggccattccctggaaggatcgctatcgaggaacggcaaggccaactcacagccttc
catataatcagtaactggttctacctcggtactgcgccatcgctgcatgaagctgaaaaa
ctcagtttcccagccgatgaattcgaccgagactgttatcgtattctttgtcgacgacta
ttccatgaaagccgcgagcacattcacttgattgacaaggtttaa
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