Serratia grimesii: SGBXF1_02041
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Entry
SGBXF1_02041 CDS
T09948
Symbol
gabR_1
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgri03000
]
SGBXF1_02041 (gabR_1)
Transcription factors [BR:
sgri03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SGBXF1_02041 (gabR_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
SMZ56409
LinkDB
All DBs
Position
1:2142364..2143887
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AA seq
507 aa
AA seq
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MKLSSDNKQHASQDAIHVTFYRHLRQGMTRRAALHLTIKQLVIAGTLGYLAKLPPSRVLA
ARLTISRDTVELTYAQLEAEGYIARAVGRGSFVSYQQNTLIGRELLASENAESTLLSERE
LSVHGRSLLVAAHAPHTRRSGALTPSLPDLRLFPIESWLQLERLAVRQGAEPLLGYADPQ
GLVELRAEIIEYLRRERGVKASADQVIVVTSSQQALSLCTQVLFNPGDRVFVEEPGYQGA
KKLAQSAGLITHPIAVDQSGMDIDALIQTEEGGRGVYITASHHYPLGHSLSIERRLKLLA
WAQHEKAWIIEDDYDSEFNYNGLTTASLQGLDQYQRTLYIGTFSKTLFPGLRIGFLIVPQ
ALIKPMVAAKQFQDGYTSALPQMTLFKCLSGDFYAEHLRNMRKIYQARLEILHAAVHQYL
GTWTQPRLPQGGLQLVCPLVDAATERRLIHAAEAQGMKIYGLIDFYTNSPTKGALVFGFA
AYTPDEIVKFIKRLSSIFSELSAPASE
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcagtagcgataataagcagcacgcatctcaggatgcgatacacgtgactttt
taccggcatttacggcaaggaatgacgcgtagagccgcgctgcatctgacgattaagcag
ctcgtgatcgccgggacgctgggttatttggcgaaactgccacccagcagggtgttggct
gcgcggctgactatttcgcgtgataccgttgaattaacctacgcccaactggaagccgaa
ggctacattgctcgcgccgtaggtcgtggcagctttgtcagttaccagcaaaatacgttg
atcggtcgcgagttgctggcgtctgagaatgcggaaagtacccttttgtcagaacgagag
cttagcgttcatggccgctccttactggttgccgcacatgctccacacactcggcgtagt
ggtgcactgaccccctcattgcccgatttgcgcttgtttcccatcgaaagctggcttcaa
ctggaaaggctggctgtgcgtcagggagccgagcctctgcttggctatgccgatccccaa
ggactggtggagctaagagcggaaatcattgagtatctgcggcgtgaaaggggtgttaaa
gccagcgcagatcaggtcattgtggtgaccagctctcagcaggcgttatcattgtgtact
caggtactctttaatcccggtgacagagtttttgttgaagagccaggctaccaaggggcc
aaaaaattggctcagtctgcgggactaatcacccatccgatcgctgtggatcaatccggt
atggatattgatgcgctgattcagacggaggagggagggcgaggtgtttatatcacggcc
tctcatcattatcccttaggccattcactcagcattgaaagaaggctgaagcttttggcg
tgggcgcaacatgaaaaagcctggattattgaagatgattacgactcagaatttaattat
aacggcctgacgaccgcctcattgcaagggttagatcaatatcaacgcactttatatatc
ggtacgttcagcaaaacgttatttcctggcttacgtattgggtttcttatcgttccgcag
gcgttaattaaacctatggtggcggcgaagcaatttcaggatggttatacgtctgcgtta
ccacaaatgacgttattcaaatgcttaagtggtgatttttatgccgagcatttaagaaac
atgcgcaagatatatcaggcccggcttgagatcctgcatgccgcggtgcatcagtacctt
ggcacctggactcaaccgagattgccgcagggcggcctacagctggtgtgcccgttggta
gacgcagccactgagcggcggttgattcatgccgccgaggcccaaggaatgaaaatctac
gggctgattgacttctataccaactctcctactaaaggtgcattggtcttcggctttgct
gcctacaccccggatgagattgtaaaatttatcaaaaggttatcatctatttttagcgaa
ctttcagcacccgcttcagaatga
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