KEGG   Serratia grimesii: SGBXF1_02389
Entry
SGBXF1_02389      CDS       T09948                                 
Symbol
spoVD_2
Name
(GenBank) Stage V sporulation protein D
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
sgri  Serratia grimesii
Pathway
sgri00550  Peptidoglycan biosynthesis
sgri01100  Metabolic pathways
sgri01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:sgri00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    SGBXF1_02389 (spoVD_2)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    SGBXF1_02389 (spoVD_2)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:sgri01011]
    SGBXF1_02389 (spoVD_2)
Enzymes [BR:sgri01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     SGBXF1_02389 (spoVD_2)
Peptidoglycan biosynthesis and degradation proteins [BR:sgri01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   SGBXF1_02389 (spoVD_2)
SSDB
Motif
Pfam: Transpeptidase PBP_dimer PBP_dimer_2
Other DBs
NCBI-ProteinID: SMZ56754
LinkDB
Position
1:2499187..2501112
AA seq 641 aa
MALLKDKIRDHSAEEMLFIRRAGVAMVLVVACFGVLIANLYRLQVKQHAFYQTRSNQNDI
KMVPIAPSRGLIFDRNGIPLVRNITLYQIQIIPSKIDNMAALLQALTPIVDLTPEDITAF
RDDMHHNGRYKPVTLKTGLTETEVARFAVNQYRFDGVTIDTYQQREYPYGAELAHVVGYV
SKINDSDLKRLDKAGLSENYAADRNIGKQGIEAYYESELHGTTGYQEVEVDNHGRVIRLL
KEQPPQAGKNIYLTLDLSLQQYIESVLKGQRAAVVVEDPRDGGILAMVSSPSYDPNPFVK
GISYKAYKTLLTNPDLPLINRVTQGLYPPASTVKPYMATSALFAGVITPNTTFFGAPTWT
LPGTQRRYRDWLKSGHGMLNVTKAIEESADTFFYQVAFEMGIDRIHSWLSQFGYGQATGI
DLNEEYRGVLPSREWKQRVHKKPWYQGDTISVGIGQGYWVATPIQMVKALTTLINNGKVK
TPHLLYSMRQGNQVTRYLPPKQAAQVGDAKSPYWGIVRNGMYGMANLPNGTGYKLFHTAP
YQIAAKSGTSQVFGLKENQTYNAKMIPVRLRDHIFYTLFAPYKNPRVAMALILENGGGDG
VVAGPTARAILDHIFDPANAPQPNADQKVKPELNDSADVQQ
NT seq 1926 nt   +upstreamnt  +downstreamnt
atggccctattaaaagataaaattcgtgaccattccgctgaggaaatgttgtttattcgc
cgtgctggcgtggcgatggtgttggttgtcgcctgttttggcgtgttgatcgcaaacctg
taccgcctacaggttaaacagcatgctttttaccaaacacgatccaatcagaacgacatt
aaaatggtgccgattgcgccgagtcgcgggctgatatttgaccgtaatggtatcccattg
gtgcgtaatattacgctgtaccagatccagattatccccagtaaaattgacaatatggct
gcactattgcaggcgttgacgccgattgtcgatctgacccccgaagatatcactgctttt
cgcgatgatatgcatcacaacggtcgctataaaccggtgacgctgaaaacgggcctgaca
gaaaccgaagtggcacgttttgcggtaaaccagtatcgctttgacggggtgaccattgat
acctatcagcagcgtgaatatccctacggggccgaattagcccatgtcgtgggctacgtc
tcgaaaatcaatgacagtgatttaaagcgattggataaagctggtttgagtgagaactat
gctgccgaccgcaatatcggtaagcagggcatcgaggcttactatgagtctgaactgcat
ggcacgaccgggtatcaagaagtggaagtggacaaccatggccgcgtgattcgcctgctg
aaggagcaaccgccacaggccggaaaaaatatctatctgacgctggatttgtctctgcaa
cagtacatcgagtcggtattgaaggggcagcgtgcggcggtggtggttgaagatccgcgc
gatggtggcattttggccatggtttccagccccagttacgatcccaatccttttgtgaaa
ggcatcagttataaagcctataaaacactgctgaccaacccagatttaccgcttattaac
cgcgtcacgcagggattgtacccaccggcctccaccgtgaaaccgtacatggcaacgtcg
gcgttgtttgctggtgttatcacccccaacaccactttttttggtgcgccgacctggaca
ctgccgggcacccagcgccgttatcgtgattggctcaagagcggacacggtatgttgaat
gtgaccaaggccattgaggaatctgccgacaccttcttctatcaggtggcgtttgaaatg
ggtattgaccgcatccacagttggctaagccaatttggttacggacaggcgacggggatc
gatctgaacgaagagtatcggggtgtgctgccaagtcgtgaatggaaacagcgggtgcat
aagaagccttggtaccaaggggacaccatatcggttgggattggtcaggggtattgggtt
gccacgcctatccagatggtgaaagcattaaccacgttgatcaataacggtaaggtgaaa
acgccccatttactgtattccatgcggcagggtaatcaggtaacgcgctatttgccaccg
aagcaggcggcacaggtaggtgatgccaaatcgccgtattggggcatcgtacgcaatggg
atgtatggtatggccaacctgccgaacggtaccggctataagcttttccatacagcaccg
taccagattgccgccaagtccgggacttcacaggtattcggtttgaaagaaaatcagact
tataacgccaaaatgatcccggtgcggttacgtgatcatattttctataccttgtttgcc
ccttataaaaatccacgagtggcaatggcgctgattctggaaaatggcgggggtgatggt
gtggtggcagggccaaccgcgcgggcgattctcgaccatatttttgacccggctaacgcg
ccgcagcctaacgcggaccagaaagttaaaccggagttaaacgacagcgcggatgtgcaa
cagtaa

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