Serratia grimesii: SGBXF1_03665
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Entry
SGBXF1_03665 CDS
T09948
Symbol
xseA
Name
(GenBank) Exodeoxyribonuclease 7 large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
sgri
Serratia grimesii
Pathway
sgri03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SGBXF1_03665 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgri03400
]
SGBXF1_03665 (xseA)
Enzymes [BR:
sgri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SGBXF1_03665 (xseA)
DNA repair and recombination proteins [BR:
sgri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SGBXF1_03665 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SMZ58013
LinkDB
All DBs
Position
1:3866260..3867651
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AA seq
463 aa
AA seq
DB search
MSLPVSPSIFTVSRLNQTVRQLLEMEMGQIWLSAEISNFSQPSSGHWYFTLKDDRAQVRC
AMFRNTNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAESMQPAGDGLLQQQFDQLKQR
LSAEGLFDQQFKQALPSPAKRVGVITSASGAALHDVLQVLQRRDPSLPIIIYPTSVQGAE
APLQIVRAIETANRRDECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPIVSAVGHET
DVTIADFVADLRAPTPSAAAELVSRNQLELLRQLQSQQQRMEMAMDYYLAQRQQQFTRIN
HRLQQQHPHLRLARQQTLLFKLQRRLEEGMQNQLRVSSRRSERAQQRLAQMQPQARIHRY
QQRVQQQEYRLQQALERQLNAWRQRFGVACSQLEAVSPLATLARGYSVTQTPCGELLKTT
KQAQVGELLKTRLQDGWVESEVKTITIAKKPRKKRTTESPPNT
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctacctgtttcgccgtctatttttaccgtaagccgcctgaatcagacggttcga
cagctgctggaaatggaaatgggccaaatttggctctccgccgagatttccaacttctcc
caaccctcttccggccactggtatttcacgctgaaagacgatcgtgcgcaggtccgttgc
gcgatgttccgcaacactaaccgtcgcaccactttccgtccgcagaatggccaacaggta
ctggttcgcgccagcattacgctgtatgaaccccgcggcgactaccagctgattgccgaa
agcatgcaacctgccggtgatggcctgctgcaacagcagttcgaccagttgaaacagcgc
ctgagcgccgaaggcctgttcgaccaacagttcaagcaagccttgcccagcccggccaaa
cgcgtcggggtcattacctccgccagcggtgccgcgctgcacgatgtgttgcaggtgctg
caacggcgtgatccttcactgcctatcatcatttaccccacgtcggtgcagggtgcagaa
gcgccattgcagattgtgcgtgccatcgaaacggctaaccgccgcgacgagtgtgacgtg
ctgattgtcggccgtggtggcggttcgctggaagatctgtggagttttaatgacgaacgc
gtagcgcgggcgattttcgccagccgcattccaattgtcagcgccgtcggccatgaaacc
gacgtcaccattgccgactttgtcgccgacctgcgtgcgccaaccccttcagccgccgcc
gaactggtcagccgcaatcagctggagctgctgcgccagttgcagtcccagcagcagcga
atggaaatggcgatggattactatctggcccagcgccaacaacagttcacccgcatcaac
caccgtttgcagcaacagcatccgcacctgcgcctggcgcgccagcagacactgttgttc
aagctgcaacgccggttggaagaaggtatgcagaaccaactgcgggtctcttcacgccgc
agcgagcgggcccaacagcgcttggcgcagatgcagccacaggcacggattcatcgctat
cagcaacgtgtgcagcagcaggaatatcgactgcagcaggcgctggagcggcagcttaac
gcctggcgtcaacgctttggcgtggcctgtagccagcttgaggcggtcagcccactggca
acgctggcgcgtggctacagcgtgacacaaaccccgtgcggtgaactgctgaagaccacc
aaacaggcgcaggtgggtgaattgctgaaaacccgtctgcaggatggctgggtggaaagc
gaggtcaagaccatcaccatcgccaaaaagccgcgcaaaaaacgcacgactgaatctccc
cctaatacttga
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