Serratia grimesii: SGBXF1_03926
Help
Entry
SGBXF1_03926 CDS
T09948
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sgri
Serratia grimesii
Pathway
sgri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SGBXF1_03926 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgri03400
]
SGBXF1_03926 (recD)
Enzymes [BR:
sgri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SGBXF1_03926 (recD)
DNA repair and recombination proteins [BR:
sgri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SGBXF1_03926 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_11
SH3_13
AAA_22
UvrD-helicase
SLFN-g3_helicase
AAA_16
nSTAND3
PhoH
UvrD_C
AAA_28
T2SSE
CbiA
ABC_tran
Flavi_DEAD
SRP54
TrwB_AAD_bind
AAA
NPHP3_N
ATPase
NTPase_1
AAA_24
Motif
Other DBs
NCBI-ProteinID:
SMZ58268
LinkDB
All DBs
Position
1:complement(4132691..4134541)
Genome browser
AA seq
616 aa
AA seq
DB search
MITLLEQAQALGVLRPLDLQFARVVARADEPDILLAAACLSAEAGAGHVCLMLEQLLPEN
LFDGRQPELAQAAWLAAGQLDVAGWQRRLSACGAVGDGTTAMPMVLQQQRLYLQRMWQNE
GEVAAFISSDSLHQSVEEAELRAILDRLFGEATDEADWQKIAAAVAATRRIAVISGGPGT
GKTTTVAKLLAALVQLAEGRRLRIQLAAPTGKAAARLTESLGSASKQLALTPEQRALFPT
EASTLHRLLGAQPNSQRMRYHSGNRLHLDVLVVDEASMVDLPMMARLIAALPAQARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSVPRAEQLSRLTGCLLQGQRAQAEAAVRDSLCLL
RKSYRFDANSGIGQLAFAVNAGDAKRALAALNGSFSDVTGYPLAETQDYQVLLDSCVTGY
RDYLRQVAEGADATAVLAAFGRFQVLCALREGPFGIAGLNERIETGLQRSGLIRRKPGAA
GRWYSGRPVMIGRNDSALGLFNGDIGIALRDESGELRVHFQLPDGSIKSVQPSRLPAHET
AYAMTVHKSQGSEFDHTVLVLPNHFMPVLTRELVYTAITRARKQLSLYATDAVLIRAIRT
PTQRRSGLAERLQITV
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgctattggagcaggcgcaggcgctcggcgtgttacgcccgcttgacctacag
ttcgcacgagtagttgcaagggccgatgagccggatattctgttggctgcggcctgtctc
agcgcagaggctggtgctggccatgtttgtctgatgttggagcagctgctgccggaaaac
ctttttgacggacgtcagccggagctggcacaggctgcatggttggctgcagggcagttg
gatgtggccggttggcaacggcgcctttctgcctgcggggcagtgggtgatggcacgact
gcaatgccgatggttttgcaacagcagcgtttgtacctacagcgaatgtggcagaacgaa
ggggaggttgctgcatttatcagcagcgatagcctccatcagtccgttgaagaagcggag
ctacgcgctattcttgaccgcctattcggcgaggcgacagatgaagcggactggcagaaa
attgcggcagccgtggcggcaacgcggcgtatagcggtcatttccggcggaccgggcacc
ggtaagaccaccacggtcgccaaattgctggcggcactggtgcaacttgctgaggggcgt
cggttgcgtattcaactggcagcgcccaccggcaaagcggcggcgcgtttaaccgaatct
ctgggcagtgccagcaaacaactggcgttaaccccggagcagcgtgcgctgttccccaca
gaagcttccacgttgcatcgcctgctgggcgctcagcccaacagtcagcgtatgcgttat
cacagtggcaatcggctgcatctggacgtgctggtagtcgatgaggcctcaatggtcgac
ttgccaatgatggcgcgtttgatagccgctttgcctgctcaggctcgggtgatttttctg
ggagaccgtgaccaactggcttcggtagaggctggggctgtattgggggatatttgccgc
tttgccgaacaaggctacagcgttccgcgagccgagcaactttcgcgtctgaccggctgt
ttattacagggacaacgtgctcaagcggaggcggcagtgcgcgacagcttgtgcctgctg
cgcaaaagctatcgctttgatgccaattcaggcattggtcaattggcttttgccgtgaat
gctggtgacgctaaacgtgccttggcggcgctcaacggcagtttcagcgatgttacgggc
tatccgttggcggaaacgcaagactaccaagtgttattggattcttgtgtgacgggttat
cgcgattacctgcggcaggtcgccgaaggtgcggatgccacggcagtgcttgcagcattt
ggccgttttcaggtgctgtgcgcgttgcgagaaggtccatttggtattgccgggttgaac
gagcgtattgagacggggttgcaacgttccggtcttatccgtcgtaagcctggtgctgcg
gggcgctggtattccggtcgtccggtgatgattggtcgcaatgacagtgcgttggggctg
tttaacggcgatatcggtattgccttacgggacgagagcggcgaactgcgcgttcacttt
caactgccagacggcagtattaagtcggtgcaaccgagccgtttaccggcgcatgaaacc
gcttatgcgatgacggtgcataagtctcagggctcagagtttgaccacacagtgctggtg
ctgcccaatcacttcatgccggtattgactcgcgaattggtctataccgcgatcacccgc
gcacgcaagcagctttcgttgtatgccactgatgcggttttgatacgagcgatccgtacg
ccaacacagcgccgcagtgggttagcagagcggttgcaaatcactgtgtaa
DBGET
integrated database retrieval system
