Serratia grimesii: SGBXF1_04086
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Entry
SGBXF1_04086 CDS
T09948
Symbol
pcnB
Name
(GenBank) Poly(A) polymerase I precursor
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sgri
Serratia grimesii
Pathway
sgri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGBXF1_04086 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgri03019
]
SGBXF1_04086 (pcnB)
Enzymes [BR:
sgri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SGBXF1_04086 (pcnB)
Messenger RNA biogenesis [BR:
sgri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SGBXF1_04086 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
SMZ58427
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All DBs
Position
1:4315117..4316436
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AA seq
439 aa
AA seq
DB search
MTVIPRDQHSISRKDISENALKVLYRLNKSGFEAYLVGGGVRDLLLGKKPKDFDITTNAT
PEQVRKLFRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEQQTPESDKNSSQQAQNGMLL
RDNIFGSIEEDAQRRDFTINSLYYGVADFTLRDYVNGLRDLKQGVIRLIGDPETRYREDP
VRMLRAVRFAAKLDMTISDETAEPIPRLASLLHEIPPARLFEESLKLLQAGYGYPTYLKL
CEYQLFQPLFPQIARHFTPNHDTPMERILAQVLKNTDYRLQNDMRVNPAFLFAAMLWYPL
LEHAQKLAQESGLAYYDAFALAMNDVLDEQCRSLAIPKRITTLVRDIWQLQLRLSRRQGK
RAHKLMEHPKFRAAYDLLALRAEVEENPEMLRLTEWWGEFQDATPARQKTMLNTLGDDPA
PRRTRQRRPRRRTPRKEGE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtaatcccacgcgaccagcattccatctcacgtaaagacatcagtgagaatgca
ctgaaggtgctataccgcctgaacaaatccggctttgaagcctatctggtcggtggcggc
gtacgtgatctgttgcttggcaaaaagccaaaagatttcgacatcaccaccaatgcaacc
ccagaacaagtgcgcaagttgttccgcaactgccgtctggttggtcgccgcttccgcctg
gcgcacgtcatgtttgggccggaaatcatcgaggttgctaccttccgtggccaccacgaa
cagcaaacgccggaatcggacaagaattcttcccagcaggcccaaaatggcatgctgttg
cgtgacaacatcttcggttcaatcgaagaagatgctcagcgccgtgacttcaccatcaac
agtttgtattacggtgtcgcggacttcaccttgcgtgattacgtcaacggcctgcgcgat
ctgaagcaaggtgtgattcgcctgatcggcgatccagaaactcgttaccgcgaagacccg
gtgcgcatgctgcgtgctgtgcgctttgccgccaagctggacatgaccatcagtgatgaa
accgccgagccgatcccacgcctggcgtcactgttacatgagatcccaccggcgcgtctg
tttgaggaatcactcaaactgttgcaggcaggctacggttatccgacctatctgaagctg
tgtgaataccagctgttccagccattattcccacagattgcacgtcacttcaccccgaac
catgacacgccaatggagcgaatcctggcacaggtgctgaagaataccgactatcgtctg
cagaatgacatgcgcgtcaatccggcgttcctgtttgctgctatgctttggtatccgttg
ctggaacatgcccagaaactggcgcaggaaagcgggttggcatattacgatgccttcgct
ctggcgatgaatgacgtgttggacgagcagtgccgctcgctggcgatcccgaaacgtatc
actactctggttcgtgatatttggcagttgcagcttcggctgtcacgccgccaaggcaag
cgcgcacacaaactaatggaacacccgaaattccgcgccgcttatgatttgctggcgctg
cgtgcggaagtagaagaaaacccggaaatgctgcgtctgaccgaatggtggggcgagttc
caggacgctactccagcacgccaaaaaaccatgttgaacactttgggtgacgatccggca
ccacgacgcacgcgtcaacgccgtcctcgtcgacggacgccgcgtaaagaaggggaataa
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