KEGG   Serratia grimesii: SGBXF1_04107
Entry
SGBXF1_04107      CDS       T09948                                 
Symbol
lpdA
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sgri  Serratia grimesii
Pathway
sgri00010  Glycolysis / Gluconeogenesis
sgri00020  Citrate cycle (TCA cycle)
sgri00260  Glycine, serine and threonine metabolism
sgri00280  Valine, leucine and isoleucine degradation
sgri00310  Lysine degradation
sgri00380  Tryptophan metabolism
sgri00620  Pyruvate metabolism
sgri00630  Glyoxylate and dicarboxylate metabolism
sgri00640  Propanoate metabolism
sgri00670  One carbon pool by folate
sgri00785  Lipoic acid metabolism
sgri01100  Metabolic pathways
sgri01110  Biosynthesis of secondary metabolites
sgri01120  Microbial metabolism in diverse environments
sgri01200  Carbon metabolism
sgri01210  2-Oxocarboxylic acid metabolism
sgri01240  Biosynthesis of cofactors
Module
sgri_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sgri_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sgri_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sgri_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sgri00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    SGBXF1_04107 (lpdA)
   00020 Citrate cycle (TCA cycle)
    SGBXF1_04107 (lpdA)
   00620 Pyruvate metabolism
    SGBXF1_04107 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    SGBXF1_04107 (lpdA)
   00640 Propanoate metabolism
    SGBXF1_04107 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    SGBXF1_04107 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    SGBXF1_04107 (lpdA)
   00310 Lysine degradation
    SGBXF1_04107 (lpdA)
   00380 Tryptophan metabolism
    SGBXF1_04107 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    SGBXF1_04107 (lpdA)
   00670 One carbon pool by folate
    SGBXF1_04107 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sgri04147]
    SGBXF1_04107 (lpdA)
Enzymes [BR:sgri01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     SGBXF1_04107 (lpdA)
Exosome [BR:sgri04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   SGBXF1_04107 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored Pyr_redox_3 GIDA FAD_binding_2 HI0933_like AlaDh_PNT_C NAD_binding_8 Thi4 FAD_binding_3 DAO Lycopene_cycl
Other DBs
NCBI-ProteinID: SMZ58448
LinkDB
Position
1:complement(4335738..4337162)
AA seq 474 aa
MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKALAEHGIVFGEPKTDIDKVRVWKEKVINQLTGGLAGMAKGRKVKVVNGLGKFT
GANTLVVEGENGPTTINFDNAIIAAGSRPIQLPFIPHEDPRVWDSTDALELKTVPERLLV
MGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDVVKVFTKRISKQFNLMLETKVTA
VEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPNGKLLEAGKAGVEVDERGFINVDKQ
LRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEVIAGMKHYFDPKVIPSIAYTEPEVAWV
GLTEKEAKEKGISYETSTFPWAASGRAIASDCADGMTKLIFDKETHRIIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEIYEGSITDLPNPKAKKK
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagtactgaaattaaaactcaggtcgtggtacttggggcgggcccggcaggctactct
gctgcctttcgttgcgctgacttaggtcttgaaaccgttctggttgaacgttattccact
ctgggcggtgtttgcctgaacgtgggatgtatcccttccaaagcactgttgcacgttgcc
aaagtgatcgaagaagccaaagcgttggctgaacacggcatcgttttcggcgagccgaaa
actgacatcgacaaagtgcgtgtctggaaagaaaaagtcatcaatcagctgactggcggt
ctggctggtatggctaaaggccgtaaagtgaaagtggttaacggcctgggcaagttcacc
ggcgctaacaccctggttgttgaaggcgaaaatggcccaacgaccatcaacttcgacaat
gccatcattgccgcaggttctcgtccgatccaactgccattcattcctcatgaagatcca
cgcgtgtgggactctaccgatgcactggaactgaaaactgtcccagagcgtctgctggtc
atgggcggcggtatcatcggcctggaaatgggcaccgtataccatgcgctgggttcacag
atcgacgtagtcgaaatgtttgaccaggtgatcccggctgctgacaaagacgtggtgaaa
gtcttcaccaaacgtatcagcaagcagttcaacctgatgctggaaaccaaagtgactgcg
gtagaagccaaagaagacggcatctatgtcactatggaaggtaagaaagcacctgcagag
ccacagcgttacgacgcggtgttggttgctatcggtcgtgtaccgaatggcaagctgctg
gaagcaggtaaagctggtgttgaagttgacgaacgtggcttcatcaacgtcgacaaacaa
ctgcgcaccaacgtgccacacatcttcgctatcggcgacatcgtcggtcaaccgatgctg
gcgcacaaaggcgtgcatgaaggccacgttgctgctgaagttatcgctggcatgaagcac
tacttcgacccgaaagtgatcccatcaatcgcttacaccgagccggaagttgcatgggtg
ggtctgaccgagaaagaagcgaaagagaaaggcatcagctacgaaacgtccaccttcccg
tgggctgcttctggccgtgctatcgcttccgattgtgcagacggcatgaccaaactgatc
ttcgacaaagaaactcaccgtatcatcggtggcgcgattgtcggcaccaacggcggcgag
ctgctgggtgagatcggtctggctatcgagatgggttgtgacgcagaagacatcgcgttg
actatccatgctcacccaaccctgcacgaatctgtaggcttggcggctgagatctacgaa
ggcagcatcaccgacttgcctaacccgaaagccaagaagaagtaa

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