Serratia grimesii: SGBXF1_04143
Help
Entry
SGBXF1_04143 CDS
T09948
Symbol
cpdB_2
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
sgri
Serratia grimesii
Pathway
sgri00230
Purine metabolism
sgri00240
Pyrimidine metabolism
sgri01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SGBXF1_04143 (cpdB_2)
00240 Pyrimidine metabolism
SGBXF1_04143 (cpdB_2)
Enzymes [BR:
sgri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SGBXF1_04143 (cpdB_2)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SGBXF1_04143 (cpdB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
Motif
Other DBs
NCBI-ProteinID:
SMZ58484
LinkDB
All DBs
Position
1:complement(4377296..4379245)
Genome browser
AA seq
649 aa
AA seq
DB search
MKMISPTKISLLAMMVAGAVNAATVDLRVMETTDVHGNVMDYDYYKDQATAQYGLVRAAS
LIDAAREEVTNSVLVDNGDIIQGSPMADYAAANLKKGEVHPVYQAMNALNYVVGNIGNHE
FNYGLDYLQLAISGAKFPYINANVYDAKTKKPYFKQYLIVDSPVKDREGKVHNLRIGYIG
FVPPQVVLWDKAKLSGKVITKDITETARELVPQMRKEGADIVIAIAHSGLSADPYKALAE
NSVYYLSQVPGIDAIAFGHSHGIFPSKSFAAIPGVDIDQGTVNGVPAVMPGHWADHLGVI
DLVLEGETNNWKVVSSRAEARPIFDKKNDKSVAAAKTALVKTLEQAHDDTRKFVNKPIGT
IAEDTNTYLALVQDSSAIQIIREAQKAYVKHYIQGDPDLADIPVISAAAPFKAGGRKNDP
AAFVDMRKGPLSFRNAADLYQYANTLAAVKVQGSDLKEWLECSAGMYNQIDVKTDKPQSL
LNWDGFRAYNFDMFDDLSYQIDVTQPARYDGDCNLINPQAQRITSLTYQGKPIAAHARFL
VAVNNYRAFTGKFAGTGEKHVVISSPDEVRTIVANYISEQTKQHGEYKPQVINSWQIAPI
SSDKKLDIRMETSPSQNAAAYIKQDAQHPMELIEKDDIGFAIYKINLQK
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgatttctccaaccaaaatttcgttattagccatgatggttgctggcgcagta
aatgctgcaacggtggatctccgcgttatggagaccaccgacgtccatggcaatgtgatg
gattacgactattacaaagatcaggctacagcccagtatggtctggtgagagccgcttcg
ttaatcgatgctgcccgtgaggaagtgaccaacagtgtgttggtggataatggtgacatt
atccagggtagtccgatggcagattatgccgccgctaatctgaaaaaaggcgaggtacat
ccggtctatcaggcgatgaacgccctgaactatgtcgttggcaatattggtaaccacgaa
ttcaattacggtttggattatttacaactggcgatcagcggggccaagttcccgtacatt
aatgccaatgtgtatgacgccaaaaccaaaaaaccttatttcaaacagtacctgatcgtg
gattcgccagttaaagatcgtgaaggcaaagtgcataatttgcgtattggctatatcggt
ttcgtgccaccgcaggtcgttctgtgggataaggcaaaactgtccggcaaggtgatcacc
aaagacatcactgaaacggccagagagttggtgccgcaaatgcgtaaagagggagcggat
atcgttatcgctatcgcccactctggcctttctgccgatccttataaagccttggcagaa
aattctgtgtattacctttcgcaggttccggggattgatgccattgcgttcggccattct
cacggcattttccctagcaagagcttcgctgcaatccccggggttgatatcgatcaggga
acagtcaacggcgtacctgcggtgatgccgggccactgggctgatcacctgggggttatt
gatctagtacttgaaggggaaactaacaactggaaggttgtatccagccgtgcagaggcg
cgaccaattttcgacaagaaaaacgacaagtcagtggcggctgccaaaacagcgctggtg
aaaacgctggaacaggcgcatgacgatacgcgtaagttcgttaacaagcctatcggtact
atcgctgaagataccaatacctatttggcgttggtgcaggactcctcagcaatccagatt
atccgtgaagcgcagaaagcctatgttaagcactatatccagggcgatccggatctggca
gatatacccgtgatttcggctgctgcaccgtttaaagccggtggcaggaagaacgatccg
gcggcctttgtcgatatgcgcaaagggcctttgagcttccgtaatgcggcagatctttac
cagtacgccaatacgctggccgcagtgaaagtacagggaagcgatctgaaagagtggtta
gagtgctctgccggcatgtataaccagatagacgtgaagacggataagccacagtcactg
cttaattgggacggttttcgcgcttataacttcgatatgtttgacgacctgagttatcaa
atagatgtgactcagcccgcgcgttacgacggcgattgcaacctgattaacccacaggcg
caacgcatcacgtcactgacctatcagggtaagccgatcgcagcccatgcgcgattcctg
gttgccgttaacaactaccgggcatttaccggcaagtttgcagggacgggggaaaagcat
gttgttatctcctctccggacgaagtgcgcaccattgttgctaattacatcagtgaacaa
accaaacaacatggtgagtataagccacaagtaataaacagctggcagattgcacctatt
tcctcggataagaaattagatattaggatggaaacatcgccaagccagaatgctgctgct
tatatcaagcaagatgctcagcaccctatggaattgattgaaaaagacgatattggtttt
gctatttataaaattaatttacagaaataa
DBGET
integrated database retrieval system
