Serratia grimesii: SGBXF1_04147
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Entry
SGBXF1_04147 CDS
T09948
Symbol
gcvP_2
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
sgri
Serratia grimesii
Pathway
sgri00260
Glycine, serine and threonine metabolism
sgri00630
Glyoxylate and dicarboxylate metabolism
sgri00670
One carbon pool by folate
sgri00785
Lipoic acid metabolism
sgri01100
Metabolic pathways
sgri01110
Biosynthesis of secondary metabolites
sgri01200
Carbon metabolism
Module
sgri_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
SGBXF1_04147 (gcvP_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SGBXF1_04147 (gcvP_2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
SGBXF1_04147 (gcvP_2)
00670 One carbon pool by folate
SGBXF1_04147 (gcvP_2)
Enzymes [BR:
sgri01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
SGBXF1_04147 (gcvP_2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
SHMT
GcvP2_C
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
SMZ58487
LinkDB
All DBs
Position
1:4382561..4386775
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AA seq
1404 aa
AA seq
DB search
MFHDDHSHPNDMLFQRRHIGPGNNEQQAMLAELQVSSLAELIDQIVPSSIRLAGPLALAN
GCSEAEALERLATIAARNPLFKSYIGMGYYDTHTPPVILRNLFENPAWYTAYTPYQPEIS
QGRLEALFNFQTMITDLTGLEIANASMLDEATAAAEAMTFCQRLSASRSPAFFVAHDCHP
QTIDVVKTRAEPLGIDVVIGDPHTDLANQEYFGVLLQYPGTYGDLIDYRSVTEAAHAKGA
LVVVSADLLALTLLMPPGEFGADVAVGTTQRFGVPMGFGGPHAGYFATRDALKRSMPGRL
VGMSVDSQGRPALRLAMQTREQHIRREKATSNICTAQALLAIIAAMYACYHGPEGLTAIA
HRVHRLTTLLAAGLRRLGYRVSTDVFFDTLSIDFESADHANVLHAQARTRRINLRASTDT
RISVSLDETTTSADVMALLSMFAQGKPVPDFAMLDAQTAGALPPQLLRTSAFLTHPVFQL
YRSETEMLRYLRHLADKDLALDRTMIPLGSCTMKLNATTEMIPVTWPEFGKLHPFAPAEQ
TTGYRELTRELEAMLCAITGYDAVSLQPNAGSQGEYAGLLAIRAYHASRGESQRDICLIP
SSAHGTNPASAQMVNMKVVVVSCDESGNVDVDDLKTKAKRYSDTLAAIMITYPSTHGVFE
ERVREICDIVHNHGGQVYIDGANMNALVGLAQPGHFGGDVSHLNLHKTFCIPHGGGGPGI
GPIGVKSHLAPYLPGHAVGSLDGGGAVSSAPYGSASILPITWTYITLMGADGLKRATEIA
ILNANYITTKLAPHYPILYTGPNGRVAHECIVDVRELKESSGISVEDIAKRLIDFGFHAP
TMSFPVAGTLMIEPTESESKAELDRFIEAMVTIREEIRAVEQGRLDPEDNPLKHAPHTAA
MLAGPWPYSYSREQAVFPRGLEHDHNNKYWPPVSRVDNVYGDRNLICSCPPLSSYPQTED
APVQPLPSREQPNNRHHQGNAMSIQEQFSQPLQIAGFDDALWHAMEAERFRQEDHIELIA
SENYTSPRVIQAQGSVLTNKYAEGYPGKRYYGGCEHVDVVEQLAITRAKQLFGADYANVQ
PHSGSQANAAVYMALIQPHDTVLGMSLAHGGHLTHGASVNFSGKIYNAVQYGIDIATGLI
DYDEVEKLALEHQPKLIVAGFSAYSRVIDWARFRAIADKVGAYLLVDMAHVAGLVAAGLY
PNPVPFADVVTTTTHKTLRGPRGGLILARANPDIEKKLNSIVFPGIQGGPLMHVIAAKAV
SFQEALQPSFITYQQQVIANARAMAAVFVERGYDIISGGTDNHLFLLSLVRQGLTGKAAD
AALGAAHITVNKNAVPNDPQSPFVTSGIRIGTPAATTRGFKEPEVRTIAGWICDILADID
NPIVINRVKHHVAELCAAFPVYGK
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atgttccatgatgaccattcacacccgaacgatatgttatttcaacgccgccacatcggg
ccaggcaacaacgaacagcaggcaatgctggccgaattgcaggtcagttcacttgctgaa
ttgattgaccagattgttccctccagcatccgcctggcgggtccgcttgcacttgccaac
ggctgcagtgaggcggaagcgcttgaacgtctggccacgatcgccgcacgcaacccgttg
tttaagtcctatatcggtatggggtattacgatacccatacgccaccagtgatcctacgt
aacctgtttgaaaatccagcgtggtacaccgcttatactccgtaccagccggaaatctcg
caaggccgcctcgaagcactgttcaatttccaaacaatgatcaccgatctgaccggcctt
gaaatcgctaacgcttcgatgcttgatgaagccaccgcggctgccgaggccatgacgttc
tgtcagcgtctgtcggcatcacggagtccagccttctttgtcgcacacgattgccaccca
cagactatcgacgtggtgaagactcgcgccgagcctttgggcatagacgtggtaatcggc
gatccacacaccgatctggccaaccaggaatactttggggtgctcttacaataccccgga
acttacggagacctgatcgattaccgctccgtcaccgaggcagcacatgccaagggcgcg
ctggtcgtggtctccgccgatctattagcactaacgctactgatgccaccgggcgagttc
ggggctgacgttgcggtgggcacgactcaacgttttggcgtgccgatgggcttcggcggt
ccacacgccggttatttcgctactcgcgacgcgttaaagcgcagcatgccgggccgtctg
gtcggcatgtcggtcgacagtcaaggccgtccggcgctgcgcctggcgatgcagacacgc
gagcaacacatccgccgcgagaaggccaccagcaatatctgcaccgcacaagcgttgttg
gcaatcatcgccgccatgtatgcctgctaccatggcccagaaggattgaccgcgatcgct
caccgtgtacaccgattgaccaccctattggccgcagggctacgccgactcggctatagg
gtatcaaccgacgttttcttcgacaccctgagcatcgatttcgagagtgctgaccacgcc
aacgtgctccatgcacaggcacgcactcgccgcatcaacttacgcgccagtaccgacact
cgcatcagtgtctccctcgacgaaacgacaacttcagccgacgtcatggcgctgttaagc
atgttcgcgcagggtaagccagtaccggacttcgccatgctggatgcgcagactgctggc
gcgcttccaccccaattgctccgcacaagcgcctttctgacacatccggtattccagctg
taccggtcagaaaccgagatgttacgttatctgcgccacctcgccgacaaggatctggcg
ctcgatcgcactatgatccccctgggcagttgcacgatgaaactgaacgccaccaccgaa
atgatcccggtgacctggccagaattcggcaagttgcacccgttcgccccagcagaacag
accaccggctatcgtgagttaacccgtgagttggaagccatgctgtgtgctatcactggc
tacgacgcggtttcgctccaaccgaatgccggctcgcagggtgaatatgcaggtttgctc
gcgatccgcgcctatcacgccagtcgtggtgagtcgcaacgcgacatctgcctgatcccc
tcctctgcccacggtactaacccggcctcggctcaaatggtaaacatgaaagtggtggtc
gtttcgtgcgatgagtccggcaacgtcgatgtcgatgacctgaaaaccaaggcaaaaagg
tacagcgacacgcttgccgcgatcatgatcacctacccgtccacccacggcgtattcgag
gagcgagtacgcgagatatgcgacatcgtccataaccacggtggccaagtctatatcgac
ggtgcaaacatgaacgcattggtcggtcttgcgcagccaggtcacttcggtggggacgtg
tcacacctgaatctgcacaaaaccttctgcataccgcacggcggtggtggccctggcatt
ggccccattggtgtgaaatctcacctggccccctacctgcccggccacgcggtgggctca
ctcgacggtggtggtgctgtgtctagcgcgccttacggcagcgcaagtatcctgccgatc
acgtggacttacatcacgctaatgggggccgatggcctgaagcgcgcgaccgagatagcg
attctcaacgccaactacatcacgaccaaactcgcaccgcactacccgattctctacacc
ggtccaaacggccgtgtggcgcacgagtgcatcgtcgatgttcgggaactgaaggagagt
tccggtatcagtgtcgaggacattgccaaacgtctgatcgatttcggctttcacgccccg
accatgtccttcccggtggcgggcaccttgatgatcgaaccaaccgagtccgaatcaaaa
gcagaactcgaccgattcattgaggcaatggtgacaatccgcgaggagatacgtgcagtc
gaacagggccgtcttgatcccgaagacaatccactcaaacacgcgccgcacaccgccgcc
atgcttgcaggaccttggccgtacagttatagccgcgaacaggcagtgtttcctcgaggg
ctagagcatgatcacaacaacaaatattggccgccggtcagccgcgtcgacaatgtctat
ggtgaccgcaacctgatttgcagttgcccaccactatcctcttacccgcagaccgaagat
gctcctgttcagcctctgccatccagagagcaacccaacaaccgccaccaccaaggaaat
gccatgtctattcaagaacaattcagccagccactgcaaatcgccggtttcgacgacgct
ttgtggcatgcgatggaagccgaacgcttccgccaggaagaccatatcgagttgatcgcg
tcggaaaactacaccagtccccgcgtgatccaggcacaaggttccgtgctaaccaacaag
tatgcagagggctacccaggcaagcgttactacggtggttgcgagcatgtcgacgtagta
gagcaactggcaataacccgggcaaaacagctttttggcgcagactatgccaacgtgcaa
ccgcactcgggtagccaagccaatgcggccgtctacatggcactgatccagccacacgac
acggtattggggatgagtttggcgcacggcggccatctcacccacggcgcctcagtcaac
ttttcgggcaagatctacaacgctgttcagtacggtattgatattgccactggccttatc
gattacgacgaagttgaaaaacttgcgcttgaacaccagccaaagctcatcgttgccggc
ttctcagcgtattcgcgcgtgatcgactgggcgagattccgcgccattgccgacaaagtc
ggtgcctacctattggtcgatatggcacatgtggcaggcctggtcgcagcgggtctgtat
ccgaaccccgttccctttgccgatgtggtcaccaccaccacacacaagacgttgcgtggc
ccgcgtggtggattgatcctggctcgtgccaatcctgacatcgagaaaaaactcaactcg
atcgtcttccccggcatccagggtggtccactgatgcatgtgatagcggcgaaagccgtc
tctttccaggaagcactgcaaccttcgttcatcacctaccaacagcaggtcatcgctaat
gctcgcgcaatggctgcggtgttcgttgaacgcggttacgacatcatctccggcggtact
gacaatcatctgttcctgttgtcgttagtccgccaagggctaaccggcaaagcggccgac
gcagccctcggagcggcacacatcacggtgaacaagaatgcagtaccgaacgatccgcag
tcgccatttgtgacctcagggatccgcatcggaacaccagcagcaaccacgcgtggcttt
aaggaaccggaagttcgcacgattgccggctggatctgtgacattcttgccgatatcgac
aaccccattgtcatcaatcgggtgaagcatcatgtcgctgagttgtgtgccgctttcccg
gtctacggcaaatag
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