Serratia grimesii: SGBXF1_04256
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Entry
SGBXF1_04256 CDS
T09948
Symbol
gabR_5
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
sgri
Serratia grimesii
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgri03000
]
SGBXF1_04256 (gabR_5)
Transcription factors [BR:
sgri03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SGBXF1_04256 (gabR_5)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
SMZ58595
LinkDB
All DBs
Position
1:4516829..4518295
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AA seq
488 aa
AA seq
DB search
MRSLSGDLLLQRLGEQPEDKLHKRLYNAIRTSILDGSLPPSSRLPASRDLAQELSLSRNT
VLTVYEQLLAEGYVLARAGSGTFVAETVPDSCLSTTSAPTGSDGEQRRIELSARGTTLLH
HASASPKQWGAFIPGVPDVNAFPHQLFSKIQARISRRPAPQRLTYSNQGGSPELQHALVD
YLRVARSVRCSPEQILITEGIHQAIDLVTRMLCNPGDDAWIEEPGYWGIRNILRMNDVNI
CPLEVDEAGMVPPEKPTGAPRLIFVTPSHQYPLGSVMSLARRQRLLALARNGGSWIVEDD
YDSEFRFSGQPIPALQGLEADAPVIYIGTFSKTLYPALRLGYVVLPKPLMAALKTAHAEL
YRGGHLLIQTALAQFIQEGHYTAHIRRMRLLYARRRAFLTTLIEQHLGKQALSEFNNNAG
LHLILNLPDEADDVAIAAAANTRGVLVRPLSRYYMLPNHRRGLLMGFACVPEEQMAAAFA
QLLECINP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
ttgcgctcactgagtggtgatctgttattgcaacgtcttggcgaacaacctgaagataag
ctgcataaacggctatataacgcgatccgcaccagtattttggacggcagcctgccgccc
tccagccggctgcctgcctcacgggatttggcgcaggaactcagcctttctcgtaacact
gtattaaccgtttatgaacaactcctggcagaaggatatgttctggctcgtgccggaagt
ggcacattcgtcgccgaaaccgtaccggatagttgtttatccactaccagtgcgccgacg
ggcagtgacggggaacaacgacgtattgaactgtcagcgcgcggtactaccctcttgcac
cacgccagtgccagcccaaaacaatggggcgcgtttattcccggcgtacccgacgttaac
gcctttccacaccagttattcagcaaaatccaggcacgcattagtcgtcgtcctgcacca
cagcgactgacttacagcaatcagggcggtagcccggagctgcaacatgctctggtggat
tatttgcgggtagcacgctcggtccgctgttctccggagcaaattctgatcacagagggt
attcatcaggcgatagatctggtgacacgcatgttgtgcaatccgggtgacgatgcgtgg
attgaagagccgggttactgggggatccgcaatatcctgcggatgaacgacgtgaatatc
tgcccgctagaggttgatgaagctggtatggtgccgccggaaaaacccactggcgcacca
cggctgattttcgttacgccctcgcaccagtatccgctgggctccgtgatgagtctggcg
cggcggcaacggctgttggcactcgcacgcaacggcggcagttggattgttgaagacgac
tacgacagcgaattccgtttctccggccagccgataccggcgctgcaagggctggaagcc
gacgcaccggtaatctacatcggcaccttcagtaaaacgctctaccccgcgctaaggttg
ggatacgtggtattgccaaaaccgttgatggcggcactgaaaacggctcatgccgaactg
tatcgtgggggtcacttgctgatccaaaccgcattggcgcaatttattcaggaaggccat
tacacggcgcatatccgccgcatgcgactgctttacgctcgacgtcgggcatttttgacc
acattgatcgaacagcatttgggtaagcaggcgctcagcgaattcaacaacaacgccggg
ttgcatctgatccttaatctgccagacgaagctgacgatgtggcgatcgccgccgctgct
aacacacgcggcgtgctggtgcgaccgctttcgcgttattacatgctgcccaaccatcgc
cgtggtctgttaatgggcttcgcctgcgtgccggaagaacagatggcagccgcctttgcc
caactgctggaatgcatcaatccctga
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