Serratia grimesii: SGBXF1_04781
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Entry
SGBXF1_04781 CDS
T09948
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgri
Serratia grimesii
Pathway
sgri03030
DNA replication
sgri03410
Base excision repair
sgri03420
Nucleotide excision repair
sgri03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgri00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGBXF1_04781 (polA)
03410 Base excision repair
SGBXF1_04781 (polA)
03420 Nucleotide excision repair
SGBXF1_04781 (polA)
03440 Homologous recombination
SGBXF1_04781 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgri03032
]
SGBXF1_04781 (polA)
03400 DNA repair and recombination proteins [BR:
sgri03400
]
SGBXF1_04781 (polA)
Enzymes [BR:
sgri01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGBXF1_04781 (polA)
DNA replication proteins [BR:
sgri03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SGBXF1_04781 (polA)
DNA repair and recombination proteins [BR:
sgri03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SGBXF1_04781 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SGBXF1_04781 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
DUF2529
Obc1_cap
WHD_BrxR
Motif
Other DBs
NCBI-ProteinID:
SMZ59116
LinkDB
All DBs
Position
1:complement(5083240..5086044)
Genome browser
AA seq
934 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLLVTPGVEADDVIGT
LAQQAEKAGHAVLISTGDKDMAQLVTPNVTLINTMNNTILGPQEVCDKYGIPPELIIDFL
ALMGDASDNIPGVPGVGEKTAQGLLQGLGGLDMLYANLDSIATLSFRGAKTMAAKLEQNK
EMAYLSYKLATIKTDVELDLTCADLEVSAPDVDVLQQLFKQYEFKRWLADVEAGVWLEGK
KGAGVKATSAAKSSASAVAETGKAAAEATLSQEGYVTILDEDTFAEWLEKLKKADVFAFD
TETDGLDTLTANLIGLSFAIAPGEAAYLPVAHDYLDAPVQLDRAHVLATLKPLLEDEKAL
KVGQNLKFDMGLLARYDISLRGIAFDTMLESYVLDSVGGRHDMDSLSDRYLGHKTVTFEE
IAGKGKKQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPQLQESAELLTVFNEIEMPLVP
VLSHIERTGVLIDQSILATHSIELTKRLAELEIQAHELAEEPFNLASTKQLQAILYEKQK
LPILKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRV
HTSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPEGYRIVAADYSQIELRIMA
HLSQDEGLLKAFAAGEDIHRATAAEVFGLPLDKVTNEQRRSAKAINFGLIYGMSAFGLAR
QLGIPRGEAQRYMDLYFERYPGVLDYMERTRQQAASQGYVSTLDGRRLYLPDVNSSNGMR
RKAAERAAINAPMQGTAADIIKRAMIEVDAWLQAQEKPLVRMIMQVHDELVFEVHESVIE
ESSQHIRELMENSMMLAVPLKVDVGVGANWDEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaattgcagaaaacccattaatcctggttgacggttcctcgtacctctaccgc
gcttatcatgccttccctccgctgactaactctgcgggtgaaccgaccggggcaatgtac
ggcgtgctgaatatgctgcgcagcctgctgttacagtatcagccgagccatgttgcggtg
gtgtttgatgccaaaggaaaaacattccgtgatgagctctttgcagaatataaatcgcat
cggccaccaatgccggacgatctgcgcgcgcaaattgagccgctgcacaaaatggtcaag
gccatggggctgccgctgctagtcacgcctggcgtagaggcagacgacgtgataggtacg
ctggcacagcaagctgaaaaagcgggtcacgcggtgctgatcagcactggtgataaagac
atggcgcagctggtaacaccgaacgtcaccctgatcaacaccatgaacaatactatcctc
ggcccgcaggaagtgtgcgacaagtacggtattccgccggagctgattatcgacttcctg
gcgctgatgggggatgcctcggataacattcctggtgtgcctggtgtgggtgagaaaacg
gctcaggggcttttacaggggcttggtgggttggatatgctttacgccaatctggacagc
atcgccacgctcagcttccgtggcgccaagaccatggcggccaaattggaacagaacaaa
gagatggcatacctctcttacaagctggccaccatcaaaaccgatgtcgaactggatctg
acctgcgccgatcttgaagtgtctgcgccggacgtcgacgtattacagcagctgtttaaa
cagtacgaatttaagcgatggctggcagatgttgaagccggcgtttggctggaaggcaag
aaaggtgccggtgtgaaagcaaccagcgcggcgaaatcttctgccagtgcagtagccgaa
accggaaaagccgcggcagaagcgacgttgtcgcaagagggttatgtcaccattctggat
gaagatactttcgctgagtggttggaaaaacttaaaaaagccgacgtatttgcctttgat
actgaaaccgatggcctggacacgctgaccgcgaacctgatcggcttgtcgtttgctatt
gccccaggcgaagccgcttatctgccggtggctcatgactatcttgatgcgccagtgcag
ttggatcgcgctcacgtgttagccaccctgaagccgctgttggaagacgagaaagcgctg
aaggtcgggcaaaacctgaagtttgatatgggtctgttggctcgttatgacatcagcctg
cgtggcattgcctttgacaccatgctggaatcctatgtgttggacagtgtgggtggccgt
cacgatatggacagcttgtctgatcgctatcttggccataaaaccgtgaccttcgaagag
attgccggtaagggtaaaaagcaacttaccttcaaccagattgcattggagcaggcagcg
ccttacgccgctgaagatgccgatgtcacgctgcaattgcatttggcgatgtggcctcag
ttgcaggaaagtgccgagctattgacggtattcaatgagatcgaaatgccgctagtgccg
gtgttatcgcatatagagcgaactggggtgctgattgatcagagtattttggctacgcat
tctatcgaactaaccaagcgcttggctgaattggaaattcaagcccatgaactggcggaa
gagccattcaacctggcgtcgactaaacagttgcaggctattctgtacgaaaaacaaaaa
ctgcctatactgaagaaaaccccgggcggtgcgccgtcgactaacgaagaagtgttggcg
gaattggcgttggattacccgttaccgaaggtgatcctggaataccgtgggttggcaaaa
ctgaaaacgacctataccgataaactgccgctgatgatcaacccggtcagtggtcgggtg
catacttcctatcatcaggcggtgacggctaccggacgtctctcctccagcgatcctaac
ctgcagaatattccggtgcgtaacgacgaagggcgccgcatccgtcaggcatttattgcc
ccggaaggctatcgtatcgttgctgccgactattctcagattgaactgcgcattatggct
cacctgtcacaggatgaggggttgctgaaagcctttgcggctggtgaagatatccaccgc
gccactgcagccgaggtgtttggcctgccactcgataaagtaaccaatgagcagcgccgc
agcgccaaagcgattaacttcggcctgatttatggcatgagcgcatttggtctggcacgt
cagctggggatccctcgtggggaagctcagcgttacatggatctctattttgagcgctat
ccaggtgtgctggactacatggagcgtactcgccagcaggcggccagtcagggctacgtc
agtacgctggatggtcgtcggttgtatctgccagacgtaaactccagcaatggtatgcgt
cgtaaggcggctgagcgtgcggcgattaatgccccaatgcaggggaccgcagcggatatt
atcaagcgcgcgatgatcgaagtggatgcctggctgcaagcccaagagaaaccgttggtg
cgtatgatcatgcaggtacacgatgaattagtgttcgaggtgcatgagtcggtgattgag
gagtccagccagcatattcgtgagctgatggaaaatagcatgatgctggcagtgccgctg
aaagtggacgtcggcgtgggtgctaactgggatgaagcccactga
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