Streptomyces griseoincarnatus: UBV09_02715
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Entry
UBV09_02715 CDS
T11026
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgro Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgro03021
]
UBV09_02715
Transcription machinery [BR:
sgro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UBV09_02715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
GerE
HTH_Crp_2
MarR_2
DUF7343
Sigma70_ECF
HTH_3
MarR
Motif
Other DBs
NCBI-ProteinID:
WPW17678
LinkDB
All DBs
Position
658682..659476
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AA seq
264 aa
AA seq
DB search
MRTVSPRKPHSHDDAPETTREFERLAGLPDGPERRRLRDDLVTAWLPMAERIAVRFRGRG
EALEDLYQVAALGLVKAVDHYDPARGNAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRTAAKELSQTTPGRPPTVAEIAEHARLTEDEVRTGTEALECFSALSLEAEMPGTD
GYALGDSIGGPDPAYDAVVDRVAVRPCLEALPERERLILYLRFFKGMTQSGIADQLGISQ
MHVSRLLSSCFAQVREELASADAG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaccgtcagtcccaggaagccccactcccatgacgacgcccccgagacgacgcgt
gaattcgagcgcctcgccggtctgcccgacgggccggagcgccggaggctgcgcgacgac
ctggtcacggcgtggctgccgatggccgagcgcatcgccgtccggttccgggggcgcgga
gaggccctggaggacctgtaccaggtggcggccctgggtctggtgaaggccgtcgaccac
tacgacccggcgcgcggcaacgccttcgaggcgtacgcggtgccgactgtcaccggcgag
atcaaacgccacttccgcgaccacatgtggacgctgcacgtgccgcgccgggtgcaggac
ctgcgcaaccgggtgcgcaccgcggcgaaggagctgtcgcagaccacgccggggcggccg
cccacggtcgccgagatcgccgagcacgcccggctgacggaggacgaggtgcgtaccggg
acggaggccctggagtgcttctccgcgctctcgctggaggcggagatgccgggcaccgac
gggtacgccctcggcgactcgatcggcggcccggacccggcgtacgacgccgtcgtggac
cgggtggcggtgcggccgtgcctggaggcgctgccggagcgtgagcggctcatcctctat
ctgcgcttcttcaaggggatgacgcagagcggcatcgccgaccagctgggcatctcccag
atgcatgtctcccgcctgctgagcagctgcttcgcgcaggtgcgcgaggagctggcgtcg
gccgacgccggctga
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