Streptomyces griseoincarnatus: UBV09_07405
Help
Entry
UBV09_07405 CDS
T11026
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03030
DNA replication
sgro03430
Mismatch repair
sgro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UBV09_07405
03430 Mismatch repair
UBV09_07405
03440 Homologous recombination
UBV09_07405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgro03032
]
UBV09_07405
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_07405
Enzymes [BR:
sgro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UBV09_07405
DNA replication proteins [BR:
sgro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UBV09_07405
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UBV09_07405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
PTCB-BRCT
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WPW18545
LinkDB
All DBs
Position
1648359..1649342
Genome browser
AA seq
327 aa
AA seq
DB search
MLEDLTAAAATPTAWPAAYPQGYAVVDVETTGLARDDRIISAAVYRLDARGETEDHWYTV
VNPERDPGPVWIHGLTSEMLEGAPLFQDIAAEFAARLEGRVLVAHNAVFDWQMIAREYAR
ARGEAPVRQRLCTIALSKELRLPLPNHKLESLAAHFGVVQRRAHHALDDARVLAEAFRPS
LRAAAAGGVRLPLHECRPLTEWSDRPRIGQQASYGGRAPSSWRPSRKRPACPYPNPGRYE
PGKRLKQGMRVAFSGDTSTERDLLEDRATEAGLHVATSLSRLTSLLVTNDPDSGTSKTVK
ARQYGTPVVDEAAFGQLLADVEPASET
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagacctcaccgccgcagccgccacccccaccgcgtggccggccgcgtatccg
cagggatacgcggtcgtcgacgtggagacgacggggctggcccgggacgaccgcatcatc
tccgcggccgtctaccggctggacgcgcgcggcgagaccgaggaccactggtacacggtg
gtcaacccggagcgcgacccgggcccggtgtggatacacgggctgacgagcgagatgctc
gagggcgcgcccctgttccaggacatcgcggcggagttcgcggcgcgcctggagggccgc
gtgctggtggcgcacaacgcggtgttcgactggcagatgatcgcccgcgagtacgcccgc
gcgcgcggcgaggccccggtgaggcaacggctgtgcacgatcgccctgtcgaaggagctg
aggctgccgctgcccaaccacaagctggagtcgctcgcggcgcacttcggcgtggtgcag
cgccgggcgcaccacgcgctggacgacgcgcgcgtgctggcggaggcgttccggcccagt
ctgcgggccgcggctgcgggcggcgttcggctgccgctgcacgagtgccggccgctcacg
gagtggtcggaccgtccccgcatcgggcagcaggcgtcctacggcgggcgggcgccgtcc
agttggcgcccctcccgcaaaagacccgcatgcccctatcccaacccgggccggtacgaa
ccgggcaagcgtctcaagcagggcatgcgggtggcgttctccggggacacgtccaccgag
cgtgacctcctggaggaccgggcgaccgaggcggggctgcacgtggcgacgagcctgtcc
cggctcaccagcctcctggtgaccaacgacccggactcgggcacgtcgaagacggtcaag
gcccgccagtacggcacgccggtggtcgacgaggccgccttcggccagctcctcgccgac
gtcgagcccgcctcggagacctga
DBGET
integrated database retrieval system
