Streptomyces griseoincarnatus: UBV09_08340
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Entry
UBV09_08340 CDS
T11026
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03030
DNA replication
sgro03410
Base excision repair
sgro03420
Nucleotide excision repair
sgro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UBV09_08340 (polA)
03410 Base excision repair
UBV09_08340 (polA)
03420 Nucleotide excision repair
UBV09_08340 (polA)
03440 Homologous recombination
UBV09_08340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgro03032
]
UBV09_08340 (polA)
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_08340 (polA)
Enzymes [BR:
sgro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UBV09_08340 (polA)
DNA replication proteins [BR:
sgro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UBV09_08340 (polA)
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UBV09_08340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UBV09_08340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
NYN_YacP
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WPW18720
LinkDB
All DBs
Position
complement(1849227..1851953)
Genome browser
AA seq
908 aa
AA seq
DB search
MADTASKKTDQTPGGSRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEAPTHFAVAFDVSRKTWRSEEFTEYKANRSKTPDEFKGQVELIGELLDAMSVPRF
AVEGYEADDVIATLATQAEAEGFDVLIVTGDRDSFQLVSDRTTVLYPTKGVSELTRFTPE
KVFEKYNLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFAELVERADEVKG
KAGQNLRDHLESVKLNRRLTELERRVDLPKGVQDLDRTAYDRKAVAMILDTLEIRNPSLR
ERLFGVDPGAEEAETTPVVADGVEIDGTVLGTGELAGWLTEHVTGPVGVAAVDTWALGTG
SVAEIALATVEGPAAWFDPAEIDEADEQAFRAWLADPARPKVFHNAKRAMRVFPEHGWTV
EGVAMDTALAAYLVKPGRRSFDLDALSLEYLHRELAPAAAPDGQLAFGADDGAQAHALMV
QARAVLDLGEAFEGRLADVGASDLLRDMELPTSALLARMERHGIAADRAHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKKTKTGYTTDADALAWLAGQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLLTADYSQIELRVMAHLSEDDGLTEAFTSGEDLHTTAAAQV
FSVEQSAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARQLMDAYFERFGGVRDY
LRRVVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
NVDRALREADLRSRMLLQVHDEIVLELAPGERDQVEELVRREMASAVELRVPLGVSVGVG
PDWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagacacagcatcgaagaagaccgaccagacccccggcggaagccgcccgcgcctg
atgctcatggacgggcactcactggcgtaccgcgcgttcttcgcgctgcccgcggagaac
ttcaccaccgcgacgggccagccgacgaacgcgatctacggcttcgcgtcgatgctcgcc
aacaccctccgtgacgaggcgcccacgcacttcgcggtcgccttcgacgtgtcccgcaag
acatggcgctcggaggagttcaccgagtacaaggcgaaccgctccaagacccccgacgag
ttcaagggccaggtcgagctgatcggtgagctgctcgacgcgatgagcgtgccccgcttc
gccgtcgaggggtacgaggcggacgacgttatcgccacgctcgccacccaggccgaggcc
gagggcttcgacgtgctgatcgtcaccggcgaccgcgactccttccagctcgtctccgac
cgcaccacggtgctgtacccgaccaagggcgtctccgagctgacccgtttcaccccggag
aaggtcttcgagaagtacaacctgacgcccgcgcagtacccggacttcgccgccctgcgc
ggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctccttcgccgagctggtcgagcgggccgacgaggtcaagggc
aaggccggccagaacctccgcgaccacctcgagtccgtcaagctcaaccgccgcctcacc
gagctggagcgccgggtcgacctgccgaagggcgtgcaggacctggaccgcaccgcctac
gaccgcaaggccgtggcgatgatcctcgacaccctggagatcaggaacccgtcgctgcgg
gagcggctgttcggcgtcgacccgggcgccgaggaggccgagaccaccccggtcgtcgcc
gacggcgtggagatcgacggcacggtgctgggcaccggcgagctggccggctggctcacg
gagcacgtcaccggcccggtcggcgtcgccgccgtcgacacatgggcgctcggcaccggc
tccgtcgccgagatcgcgctcgccacggtggagggaccggccgcctggttcgacccggcc
gagatcgacgaggccgacgagcaggcgttccgcgcctggctcgccgacccggcccgcccc
aaggtgttccacaacgccaagcgtgcgatgcgcgtcttccccgagcacggctggacggtc
gagggcgtcgccatggacacggcgctcgccgcgtacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtcccttgagtacctgcaccgggagctggcgcccgccgccgcg
cccgacgggcagctcgccttcggcgcggacgacggcgcccaggcgcacgccctcatggtg
caggcccgcgccgtcctcgacctgggcgaggccttcgagggccgcctcgcggacgtcggc
gcctccgacctgctgcgcgacatggagctgcccacctccgccctgctcgcccgcatggag
cggcacggcatcgcggccgaccgggcgcaccttgaggccatggagcagatgttcgccggc
gcggtgcagcaggcggtgaaggaggcccacgcggcggccggacacgagttcaacctgggc
tcgcccaagcagctccaggaggtcctcttcggcgagctggccctgcccaagacgaagaag
acgaagaccggctacaccacggacgcggacgcgctggcctggctcgccggccagacggac
aacgagctgccggtcatcatgctgcgccaccgcgagcaggccaagctccgcgtcaccgtc
gagggcctgatcaagacgatcgccgcggacggccgcatccacaccacgttcaaccagacc
gtcgccgcgacgggccggctgtcctccacggaccccaacctgcagaacatccccgtccgc
acggacgagggccgcgccatccgtcgcggcttcgtcgtcggtgagggcttcgagtcgctg
ctcaccgccgactacagccagatcgagctgcgcgtcatggcccacctctccgaggacgac
ggcctcaccgaggcgttcacctccggcgaggacctgcacaccacggccgccgcccaggtg
ttctccgtcgagcagtccgccgtggacgcggagatgcgccgcaagatcaaggcgatgtcc
tacggcctggcctacgggctgtccgccttcggcctctcccagcagctgaacatcgaggcg
gcggaggcgcgccagctgatggacgcctacttcgagcgcttcggcggcgtgcgggactat
ctgcgccgtgtcgtcgacgaggcgcgggcgacggggtacacggcgaccctcttcggccgc
cgccgctacctgcccgacctcaacagcgacaaccgccagcggcgggaggcggcggagcgg
atggcgctgaacgcgccgatccagggcacggccgcggacatcgtcaagatcgccatgctg
aacgtcgaccgcgccctgcgcgaggcggacctgcgctcccgcatgctgctccaggtccac
gacgaaatcgtcctggaactggcccccggggagcgggaccaggtcgaggaactggtccgc
cgcgagatggcctccgcggtcgagctgagggtccccctcggcgtctcggtgggcgtgggc
ccggactgggagtcggcggcgcactga
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integrated database retrieval system
