Streptomyces griseoincarnatus: UBV09_16905
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Entry
UBV09_16905 CDS
T11026
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
sgro Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgro03032
]
UBV09_16905 (gyrB)
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_16905 (gyrB)
Enzymes [BR:
sgro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
UBV09_16905 (gyrB)
DNA replication proteins [BR:
sgro03032
]
Prokaryotic type
DNA Topoisomerases
UBV09_16905 (gyrB)
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
UBV09_16905 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
WPW20266
LinkDB
All DBs
Position
3746099..3748156
Genome browser
AA seq
685 aa
AA seq
DB search
MADSGNPNENIPSTDTAAGDAAGSSTGDATSYDASAITVLEGLDAVRKRPGMYIGSTGER
GLHHLVQEVVDNSVDEALAGHADTIDVTILADGGVRVVDNGRGIPVGIVPSEGKPALEVV
LTVLHAGGKFGGGGYAVSGGLHGVGVSVVNALSTRVAVEVKTDGHRWTQDYKLGVPTAPL
QRHEATEETGTSVTFWADGDIFETTDYSFETLSRRFQEMAFLNKGLRINLTDERESAKAT
AGADEAGEDEKHEVKSVSYHYEGGIVDFVKYLNSRKGEVVHPTVIDLEAEDRERHLSLEV
AMQWNGGYTEGVYSFANIIHTHEGGTHEEGFRAALTSLINKYARDKKLLRDKDDNLTGDD
IREGLTAIISVKLSEPQFEGQTKTKLGNTEVKTFVQKVVYEHLADWLDRNPNEAADIVRK
GIAAATARVAARKARDLTRRKGLLETASLPGKLSDCQSNDPTKCEIFIVEGDSAGGSAKS
GRNPEYQAILPIRGKILNVEKARIDRILQNQEIQAMISAFGTGVHEDFDIEKLRYHKIIL
MADADVDGQHINTLLLTFLFRFMRPLVEAGHVFLSRPPLYKIKWGKDDFEYAYSDRERDA
LIEMGRNAGKRIREDSVQRFKGLGEMNAEELRITTMDQEHRVLGQVTLDDAAQADDLFSV
LMGEDVEARRAFIQRNAKDVRFLDI
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
gtggccgattccggcaaccccaacgagaacatcccgtccaccgacaccgccgcaggcgac
gcggcaggctcctcgaccggagacgccacgtcgtacgacgcgagtgccatcaccgtcctc
gagggcctggacgcggtccgcaagcgacccggcatgtacatcgggtcgacgggcgagcgg
ggcctgcaccacctggtgcaggaggtcgtcgacaactcggtcgacgaggcgctggccggc
cacgcggacaccatcgacgtgacgatcctggccgacggcggcgtccgcgtcgtcgacaac
ggccgtggcatccccgtgggcatcgtcccctccgagggcaagcccgccctcgaggtcgtc
ctcaccgtgctgcacgcgggcggcaagttcggcggcggcggttacgcggtctccggcggt
ctgcacggcgtgggcgtgtccgtggtcaacgcgctgtcgacgcgcgtcgccgtcgaggtg
aagaccgacggccaccgctggacgcaggactacaagctgggcgtccccaccgcgcccctg
cagcggcacgaggcgacggaggagaccggcacgtcggtcaccttctgggccgacggcgac
atcttcgagaccacggactactcgttcgagacgctctcccggcgcttccaggagatggcg
ttcctgaacaagggcctgcggatcaacctcaccgacgagcgtgagtcggcgaaggcgacc
gccggcgcggacgaggcaggcgaggacgagaagcacgaggtcaagagcgtctcgtaccac
tacgagggcggcatcgtcgacttcgtgaagtacctcaactcccgcaagggcgaggtggtt
caccccaccgtcatcgacctcgaggcggaggacagggagcggcacctgtcgctcgaggtc
gccatgcagtggaacggcggctacacggagggcgtgtactcgttcgccaacatcatccac
acccacgagggcggtacgcacgaggagggcttccgtgcggcgctgacctcgctgatcaac
aagtacgcgcgcgacaagaagctgctccgcgacaaggacgacaacctcaccggtgacgac
atccgcgagggtctgaccgcgatcatctcggtcaagctgagcgagccgcagttcgagggc
cagaccaagaccaagctgggcaacaccgaggtgaagaccttcgtgcagaaggtcgtctac
gagcacctcgccgactggctggaccgcaacccgaacgaggccgcggacatcgtccgcaag
ggcatcgcggcggccaccgcgcgcgtggcggcccgcaaggcgcgcgacctgacgcgccgc
aagggtctgctggagacggcgtcgctgcccggcaagctgtccgactgccagtcgaacgac
ccgaccaagtgcgagatcttcatcgtggagggtgactccgcgggcggctcggccaagtcc
ggccggaaccccgagtaccaggcgatcctcccgatccgcggaaagatcctcaacgtcgag
aaggcgcgcatcgaccggatcctgcagaaccaggagatccaggcgatgatctccgcgttc
ggcaccggtgtgcacgaggacttcgacatcgagaagctccgctatcacaagatcatcctg
atggcggacgccgacgtcgacggccagcacatcaacaccctgctgctgacgttcctgttc
cgcttcatgcggccgctggtcgaggccgggcacgtgttcctctcccgtcccccgctctac
aagatcaagtggggcaaggacgacttcgagtacgcgtactccgaccgcgagcgcgacgcg
ctgatcgagatgggccgcaacgccggcaagcgcatccgtgaggactccgtccagcgcttc
aagggcctcggtgagatgaacgccgaggagctgcgcatcaccacgatggaccaggagcac
cgggtcctcgggcaggtcaccctggacgacgccgcccaggccgacgacctcttctccgtc
ctgatgggcgaggacgtcgaggcccgccgcgcgttcatccagcgcaacgccaaggacgtc
cgcttcctcgacatctga
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