Streptomyces griseoincarnatus: UBV09_22435
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Entry
UBV09_22435 CDS
T11026
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03420
Nucleotide excision repair
sgro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UBV09_22435
03430 Mismatch repair
UBV09_22435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_22435
Enzymes [BR:
sgro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UBV09_22435
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UBV09_22435
MMR (mismatch excision repair)
Other MMR factors
UBV09_22435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WPW21272
LinkDB
All DBs
Position
4915749..4919288
Genome browser
AA seq
1179 aa
AA seq
DB search
MPARISRPDQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELTERVRTALIKAGVTDPDPLPSPGHHPSTTALRTGPSPSDPD
NPPGEPVISTYHAFAGRLLTDHGLRIGLEPTSRLLADATRYQLAARVLREAPGLYPALTR
SFPDLVGDLLTLDAELSEHLVRPEDVRAHDADLLRALENAKLSNADLRKVPEAAAARREL
AELVQRYRNAKRERDLFDFGDQIALSARLAGLPEVGRVLRDEFRVVLLDEYQDTSVAQRV
LLAGLFGGGTGHPVTAVGDPCQAIYGWRGASVANLDDFPEHFPHADGRPATRQSLSENRR
SGGRLLDLANGLAEPLRAMHAGVEALRPAPGAERDGIVRCALLRTHSEEIDWLADSIAHL
VNTGKAPGEIAVLCRTATDFGEIQAALVARDVPVEVVGLSGLLHLPEIADLVAVCEVLQD
PGANASLVRLLTGPRWRIGPRDLALLGRRARRLVSHARVDGDDDPDRRLAEAVEGVDPAE
VISLADALDTFLETPMEGGGDEDGLPFSPDARVRFARLAAELRDLRRSLSDPLMDVLHRV
LAVTGLEVELSASPHALAARRRETLSNFLDVAASFASGDNEATLLAFLGFLRTAAQYEKG
LDNALPGGENTVKVLTAHKSKGLEWDVVAVPGLVTGAFPSDRGREKWTAQGKVLPHALRG
DADTLPDVPSWDSRGLKAFHEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKP
RGPSEFLLALHDHCAAGHGEIEAWAEEPEEDEENPALRQAGDVQAWPLPLDDTALARRRA
AAATVLAHLDRLAADPHGAAAVHDPGAHDDPEWPPPPDDEEPYPADHADDPYPEEPGAVD
AADWDSLPTERPVLPHQATAPDESAPSRPDLPAPAEARLTPEEARTVASWDRDLDALTGE
LLRARDTVTEVRLPASLTASQLLRLADDPDGFARELARPMPRPPQPAARRGTRFHAWVEA
RFEELTLPMLDPDELPGADAEIADERDLDELKEAFERTEYAHRTPYRVEAPFQLSIAGRV
VRGRIDAVYRHERAEDGDAVTYEIVDWKTGRGRTADPLQLAVYRLAWAEQQGVPLESVTA
AFLYVRSGEVVRPERLPGRAELERLLLDEPDAETPRPGR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgcccgtatcagccgtcccgaccagctcaaggagctgctcgggatcccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtggccggagcg
ggctccggcaagacgacggtgatggcggcccgcgtggtctggctggtcggcaccggccag
gtcgctcccgagcaggtcctcggcctcaccttcaccaacaaggccgccggcgaactcacc
gaacgcgtccgcaccgcgctgatcaaggccggcgtcaccgacccggaccccctcccgtca
cccggccaccacccctcgacgacggcgcttcgcaccggcccctccccgtcggacccggac
aaccccccgggcgagccggtgatctccacgtaccacgccttcgccggccggctgctcacc
gaccacgggctgcgcatcggcctcgaaccgacgtcccggctgctcgccgacgccacccgc
taccagctcgccgcgcgcgtgctgcgcgaggcgcccggcctctacccggccctcacccgc
tccttccccgacctggtgggcgacctcctcaccctcgacgcggagctctccgagcacctg
gtgcgcccggaggacgtgcgcgcccacgacgccgacctgctgcgcgccctggagaacgcc
aaactcagcaacgccgacctgcgcaaggtccccgaggccgccgccgcccgccgtgaactc
gccgagctggtgcagcgctaccggaacgccaaacgcgaacgcgacctgttcgacttcggc
gaccagatcgccctgtccgcccggctcgccggcctgcccgaggtgggccgcgtgctgcgc
gacgagttccgggtggtcctcctcgacgagtaccaggacacgtcggtcgcccagcgcgtc
ctcctcgcgggcctcttcggcggcggcaccggccacccggtgaccgccgtgggcgacccc
tgccaggccatctacggctggcgcggcgcctccgtagccaacctcgacgacttccccgag
cacttcccccacgccgacggccgccccgccacccgccagtcactcagcgagaaccgccgc
agcggcggccggctgctcgacctcgccaacggcctcgccgagccgctgcgcgccatgcac
gcgggcgtggaggccctccgcccggcgcccggcgccgaacgcgacggcatcgtccgctgc
gccctgctgcgcacccactccgaggagatcgactggctcgccgactcgatcgcgcacctc
gtgaacaccggcaaggcgcccggcgagatcgccgtgctgtgccgcacggcgaccgacttc
ggcgagatccaggccgcgctggtcgcccgggacgtgcccgtcgaggtcgtcggcctgtcc
gggctgctgcacctgccggagatcgccgacctggtcgccgtctgcgaggtcctccaggac
cccggcgccaacgcctccctcgtccggctgctgaccggcccgcgctggcggatcggcccc
cgcgacctcgccctgctcggccgccgcgcgcgccggctggtgtcccacgcgcgcgtggac
ggcgacgacgaccccgaccggcggctcgccgaggccgtcgagggcgtcgaccccgccgag
gtgatctcgctcgccgacgccctcgacaccttcctggagaccccgatggagggcggcggg
gacgaggacggcctgcccttctcgcccgacgcgcgcgtccgcttcgcccgtctcgccgcc
gagctgcgcgacctgcgccgctccctgtccgacccgctgatggacgtactgcaccgggtg
ctcgccgtcaccggactcgaggtcgagctgtccgcgtccccgcacgcgctggccgcccgc
cgccgggagaccctgtccaacttcctcgacgtcgccgcgtccttcgcctccggcgacaac
gaggccaccctgctcgccttcctcggcttcctgcgcacggccgcccagtacgagaagggc
ctggacaacgcgctgccgggaggcgagaacaccgtcaaggtgctcaccgcccacaagtcc
aaggggctggagtgggacgtcgtcgccgtcccgggcctggtcaccggtgccttccccagc
gaccggggccgcgagaagtggacggcgcagggcaaggtgctgccgcacgcgctgcgcggt
gacgccgacaccctccccgacgtgccgtcctgggactcgcggggcctgaaggccttccac
gaggcgatgaaggaacaccagcacaccgaggagctgcgcctcggctacgtcaccttcacc
cgcccccgctccctgctgctcggctccggccactggtggggccccagccagaagaagccg
cgcggcccctccgagttcctgctcgccctccacgaccactgcgccgccgggcacggcgag
atcgaggcgtgggcggaggaacccgaggaggacgaggagaacccggcgctgcggcaggcc
ggcgacgtccaggcgtggccgctgcccctggacgacacggccctggcccggcgccgcgcc
gccgcggcgaccgtcctcgcccacctcgaccgtctcgccgccgacccgcacggcgcggca
gccgtccacgacccgggcgcccacgacgacccggaatggccgccaccgccggacgacgag
gagccgtacccggcggaccacgccgacgatccgtacccggaggagcccggcgcggtggac
gccgccgactgggactccctgcccaccgagcgccccgtcctcccccaccaggcgaccgcc
ccggacgagtccgcaccgtcccggccggacctccccgcgcccgccgaggcgcgcctcact
cccgaggaggcccgcaccgtcgcctcctgggaccgcgatctggacgccctcacgggggag
ctgctgcgcgcccgcgacaccgtcaccgaggtgcggctgcccgcctccctcaccgcgtcc
cagctgctccggctggccgacgaccccgacggcttcgcccgagagctggcccgccccatg
ccgcggccgccccagcccgccgcgcgccggggaacccgcttccacgcgtgggtcgaggcg
cgcttcgaggagctgaccctgcccatgctcgacccggacgagctgccgggcgccgacgcc
gagatcgccgacgagcgcgacctcgacgagctcaaggaggccttcgaacgcaccgagtac
gcccaccgcacgccctaccgcgtggaggcgccgttccagctgtcgatcgccggccgagtc
gtccggggccgcatcgacgccgtgtaccggcacgagcgcgccgaggacggtgacgccgtg
acgtacgagatcgtcgactggaagaccggccggggccgcaccgccgacccgctgcagctc
gcggtctaccggctcgcctgggccgagcagcagggcgtccccctggagtcggtcaccgcc
gcgttcctgtacgtccgcagcggcgaggtggtccgaccggagcggcttcccggccgtgcc
gagctggagcgcctgctgctcgacgaaccggacgctgagacaccgcgccccggacggtga
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