KEGG   Streptomyces griseoincarnatus: UBV09_24280
Entry
UBV09_24280       CDS       T11026                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
sgro  Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:sgro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgro03032]
    UBV09_24280
   03036 Chromosome and associated proteins [BR:sgro03036]
    UBV09_24280
   03400 DNA repair and recombination proteins [BR:sgro03400]
    UBV09_24280
DNA replication proteins [BR:sgro03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    UBV09_24280
Chromosome and associated proteins [BR:sgro03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    UBV09_24280
DNA repair and recombination proteins [BR:sgro03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      UBV09_24280
SSDB
Motif
Pfam: Bac_DNA_binding HC2 Extensin_1 KCTD18_C
Other DBs
NCBI-ProteinID: WPW21604
LinkDB
Position
5312401..5313024
AA seq 207 aa
MNKAQLVEAIADKVGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLTGGASATVKK
AAAKKTTAKKAATAKKAAAKKTTAKKATAKTTASKTTAKKAPAKSTAAAKSTAAKKTTAK
KAPAKKAPAKKSTARKTTAKKTTARKK
NT seq 624 nt   +upstreamnt  +downstreamnt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccgccagcaggcc
gccgacgccgtcgaccacgtactggacgccatcgtccgcgcggtcgtctcgggggagcgg
gtatcggtcaccggcttcggttcgttcgagaaggtcgaccgccccgcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtcccgcgtttccgcgcg
ggtcagggcttcaaggacctggtcagcggctcgaagaagctgccgcgcggcggcgaggtc
gccgtgaagaaggctcccaagggcagtctcaccggcggcgcttcggcgacggtgaagaag
gccgcggccaagaagacgacggccaagaaggccgccaccgccaagaaggcggccgcgaag
aagacgacggccaagaaggccaccgccaagaccacggcgagcaagaccacggcgaagaag
gcccccgccaagtcgactgccgcggccaagagcaccgccgcgaagaagaccacggcgaag
aaggccccggcgaagaaggcccccgccaagaagtcgaccgcgcgcaagaccaccgccaag
aagaccaccgcccgcaagaagtag

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