Streptomyces griseoincarnatus: UBV09_24280
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Entry
UBV09_24280 CDS
T11026
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sgro Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgro03032
]
UBV09_24280
03036 Chromosome and associated proteins [BR:
sgro03036
]
UBV09_24280
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_24280
DNA replication proteins [BR:
sgro03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
UBV09_24280
Chromosome and associated proteins [BR:
sgro03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
UBV09_24280
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
UBV09_24280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Extensin_1
KCTD18_C
Motif
Other DBs
NCBI-ProteinID:
WPW21604
LinkDB
All DBs
Position
5312401..5313024
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AA seq
207 aa
AA seq
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MNKAQLVEAIADKVGGRQQAADAVDHVLDAIVRAVVSGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVAVKKAPKGSLTGGASATVKK
AAAKKTTAKKAATAKKAAAKKTTAKKATAKTTASKTTAKKAPAKSTAAAKSTAAKKTTAK
KAPAKKAPAKKSTARKTTAKKTTARKK
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaaggtgggcggccgccagcaggcc
gccgacgccgtcgaccacgtactggacgccatcgtccgcgcggtcgtctcgggggagcgg
gtatcggtcaccggcttcggttcgttcgagaaggtcgaccgccccgcccgttacgcccgc
aacccccagacgggcgagcgggttcgggtcaagaagacctccgtcccgcgtttccgcgcg
ggtcagggcttcaaggacctggtcagcggctcgaagaagctgccgcgcggcggcgaggtc
gccgtgaagaaggctcccaagggcagtctcaccggcggcgcttcggcgacggtgaagaag
gccgcggccaagaagacgacggccaagaaggccgccaccgccaagaaggcggccgcgaag
aagacgacggccaagaaggccaccgccaagaccacggcgagcaagaccacggcgaagaag
gcccccgccaagtcgactgccgcggccaagagcaccgccgcgaagaagaccacggcgaag
aaggccccggcgaagaaggcccccgccaagaagtcgaccgcgcgcaagaccaccgccaag
aagaccaccgcccgcaagaagtag
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