KEGG   Streptomyces griseoincarnatus: UBV09_24870
Entry
UBV09_24870       CDS       T11026                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sgro  Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:sgro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sgro03016]
    UBV09_24870 (truB)
Enzymes [BR:sgro01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     UBV09_24870 (truB)
Transfer RNA biogenesis [BR:sgro03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    UBV09_24870 (truB)
 Prokaryotic type
    UBV09_24870 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD DinB_2
Other DBs
NCBI-ProteinID: WPW21716
LinkDB
Position
5442520..5443428
AA seq 302 aa
MTQKQTPPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTVRLGQTTVTDDAEGEITASADASRVTREAIDAGIAALTGDIMQV
PSKVSAIKINGVRSYKRAREGEDFDIPARPVTVSSFSVYDVREAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYRLDAAKTLDELQEKLTVMPIAEAAA
AAFPRWDVDERRAKLLTNGVRLEMPEEYAGRGPVAVFGPEGRFLVLVEEQRGKAKSVAVF
AT
NT seq 909 nt   +upstreamnt  +downstreamnt
atgacccagaagcagaccccgcccgacggccttgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtggtcgccaagatgcgcggcatcgcccgcacccgccgtgtcggccac
gccggcaccctcgacccgatggcgaccggtgtgctcgtcctcggcgtcgagcgggcgacc
aagctcctcggccacctggcgctgaccgagaaggagtacctcggcacggtccggctcggc
cagaccaccgtcaccgacgacgccgagggggagatcaccgcctccgccgacgcctcacgc
gtcacccgcgaggccatcgacgcggggatcgccgccctgaccggcgacatcatgcaggtg
ccgtcgaaggtcagcgccatcaagatcaacggggtgcgctcctacaagcgggcgcgggag
ggcgaggacttcgacatccctgcccggccggtcaccgtctcgtcgttctccgtgtacgac
gtccgcgaggccgtcgccgaggacggcaccccggtgctggacctggtcgtctccgtggtc
tgctcctccggcacctacatccgcgccctcgcccgcgacctgggcgcgggactgggcgtc
ggcggccatctgaccgcgctgcgccgcacccgcgtcgggccgtaccggctggacgctgcg
aagaccctggacgagcttcaggagaagctgacggtcatgccgatcgccgaggccgcggcg
gccgcgttcccccgctgggacgtcgacgaacgccgcgccaagctgctgacgaacggcgtc
cgcctggagatgccggaggagtacgccggccgggggccggtggctgtcttcgggccggag
gggcggttcctggtgctcgtggaggagcagcgggggaaggcgaagagcgtggcggtcttc
gccacgtga

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