Streptomyces griseoincarnatus: UBV09_24985
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Entry
UBV09_24985 CDS
T11026
Name
(GenBank) HAMP domain-containing protein
Organism
sgro Streptomyces griseoincarnatus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Baculo_PEP_C
ATG17_like
DUF4795
Nup49_C
RNase_Y_N
ATG14
OKR_DC_1_N
OmpH
Motif
Other DBs
NCBI-ProteinID:
WPW21732
LinkDB
All DBs
Position
5475206..5480683
Genome browser
AA seq
1825 aa
AA seq
DB search
MESGAATRSTKTTRAKGGQSLSKAGKARGGTVTVEAAAMNRLLGALVSMRDGNFRKRLTV
TGDGVMAEIAAVFNEVADRNLHLTGELARVRRMVGREGKLTERLETGPSEGSWAAAIDHS
NALVDDLVRPVSEVSRVLSAVAEGDLSPRMELRTQAPDGTGHPLRGEFLKVARTVNNLVD
QLSTFTDEVTRVASEVGTEGKLGGQAQVRGMSGSWKDLTDSVNTMAERLTAQVRDIALVT
TAVARGDLSRKVTVHVEGEMLELKNTVNTMVDQLSAFSSEVTRVAREVGTEGALGGQAQV
PGVDGVWKELTDSVNTMAGNLTAQVRGIAEVTTAVANGDLSRKVTVPARGEVAQLAETIN
QMTETLRIFADEVTRVANEVGAEGRLGGQANVPGAAGTWKDLTDSVNTVFRNLTTQVRDI
AAVTTAVANGDLSQKVTVDVAGEMLELKNTVNTMVDQLSAFGAEVTRVAREIGVEGELGG
QAQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLK
NTVNTMVDQLSSFADQVTRMARDVGTEGRLGGQAQVPGVSGTWKELTDSVNSMAGNLTSQ
VRNIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSSFADQVTRVAREVGTEG
RLGGQAQVPGVAGVWRDLTDSVNGMASNLTGQVRNIAQVATAVARGDLSQKITVDARGEI
LELKNTLNTMVDQLSSFAEEVTRVAREVGTEGILGGQAEVQGVSGTWKDLTQSVNGMANN
LTLQVRNIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREV
GTEGILGGQAHVPGVTGIWKDLSDNVNLMAKNLTTQVRNISQVSAAVANGDLTRQVSIEA
RGEVAQLADTINTMVKTLSAFAEQVTKVAREVGTDGILGGQAHVPGVAGTWKDLTESVNG
MASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRV
AREVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKI
DVDASGEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLEDVASLIM
SELTPVVSAQHGAFFLAMPLVDGEDLNAAAEEQFELRMLGSYGYSMGSMPTSFQPGEGLI
GTAAMEKRTILVGKAPSGYLKISSGLGEAPPAQVIVLPVVFEGKVLGVIELASFTPFTAI
QKDFLNQIAEMIATSVNTISVNTKTERLLAQSQELTEQLRERSAELEQRQKALQASNAEL
EEKAELLARQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSL
LILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIAL
VQLVDYVEATFRPLTAEKGLDLSVRISPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGS
VELVIRPARDEVPQAIREQLLEAGSLADPDADLIAFSVSDTGIGIAAGKMRVIFEAFKQA
DGTTSRKYGGTGLGLSISREIAQLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPNGYQQP
PMPALGAGDLVASAELPAAPEETPAEVTSYREAQNGPAALFRRRRRVSLRQDQRPSAELE
EWPAVEQEAQAARTPRKGIRFGGQKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGI
EVLEQHDDVAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESG
ASDYVTKPVDPDHLLTVMEQWMRGE
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggagcacgaagacgacgcgcgcgaaaggcggacagtcc
ctgagtaaggcggggaaggcccgaggcggcacggtgacggtggaggcggccgcgatgaac
cgcctgctgggcgccctggtgtcgatgcgggacgggaacttccgcaaacgcctcacggtg
accggcgacggtgtgatggcggagatcgccgccgtcttcaacgaggtcgccgaccggaac
ctgcacctcacgggcgagctggcgcgcgtgcgccgcatggtggggcgtgagggaaagctc
acggaacggctggagacggggccctcggagggctcctgggcggccgcgatcgaccactcc
aacgccctggtggacgatctcgtacggccggtctccgaggtgagccgggtgctgtcggcg
gtggcggagggtgatctgtcgccgcggatggagctgcggacgcaggcgccggacgggacc
gggcatccgctgcgtggcgagttcctgaaggtcgcgcggaccgtgaacaacctggtcgac
cagctctcgacgttcaccgacgaggtcacgcgcgtggccagcgaggtgggcaccgagggc
aagctgggcggtcaggcgcaggtgcgcggcatgtccgggtcctggaaggacctgacggac
tccgtgaacacgatggcggagcggctgacggcgcaggtgcgcgacatcgcgctggtgacg
acggccgtggcgcgcggtgacctgtcgcgcaaggtcacggtgcacgtcgagggggagatg
ctcgagctgaagaacaccgtcaacacgatggtggaccagctctccgcgttctcctccgag
gtgacacgcgtcgcccgcgaggtgggcaccgagggcgccctgggcggtcaggcgcaggtg
ccgggtgtcgacggtgtgtggaaggagctcaccgactccgtcaacaccatggccgggaac
ctcaccgcgcaggtgcgcgggatcgccgaggtgacgacggcggtcgccaacggtgacctg
tcgcgcaaggtgacggtgccggcgcgcggcgaggtggcgcagctcgccgagacgatcaac
cagatgaccgagacgctgcggatcttcgcggacgaggtcacgcgggtcgccaacgaggtc
ggcgccgaggggcgtctgggcggtcaggcgaacgtgccgggcgccgcgggcacctggaag
gacctcacggactccgtcaacacggtcttccggaacctcaccacccaggtgagggacatc
gcggcggtcaccacggcggtggccaacggcgacctgtcgcagaaggtcaccgtggacgtg
gccggcgagatgctggagctgaagaacaccgtcaacacgatggtcgaccagctctccgcg
ttcggcgccgaggtgacgcgagtggcgcgggagatcggcgtcgagggcgagctgggcggc
caggcgcaggtgccgggcgcggccggtacgtggaaggacctgacggactccgtcaacacc
gcgttccgcaacctcaccggacaggtgcgcaacatcgcccaggtgacgacggcggtggcc
aacggtgacctgtcgcagaaggtcaccgtggacgtctccggcgagatgctccagctgaag
aacaccgtgaacacgatggtggaccagctgtcgagcttcgccgaccaggtcacgcggatg
gcgcgggacgtgggcacggagggccggctgggcggtcaggcgcaggtgcccggggtgtcc
ggcacctggaaggagctcaccgactccgtcaactcgatggccggcaacctcacctcccag
gtgcggaacatcgcccaggtcaccacggccgtggcgcgcggcgacctgtcgcagaagatc
gacgtggacgcgcgcggggagatcctcgagctcaagaacaccatcaacacgatggtcgac
cagctgtcgtcgttcgccgaccaggtgacccgggtggcccgcgaggtgggcaccgagggc
cgtctcggcggtcaggcgcaggtgcccggtgtggccggcgtgtggcgtgacctgacggac
tccgtgaacggcatggcgtccaacctgaccggccaggtgcgcaacatcgcgcaggtggcg
acggcggtggcgcgcggtgacctctcgcagaagatcaccgtcgacgcgcgcggggagatc
ctcgagctgaagaacacgctgaacacgatggtggaccagttgtcgtcgttcgccgaggag
gtgacccgggtggcccgcgaggtgggcaccgagggcatcctgggcggccaggcggaggtg
cagggcgtctccggcacctggaaggacctcacgcagtccgtgaacggcatggcgaacaac
ctgacccttcaggtgcgcaacatcgccgaggtcaccacggcggtcgccaagggcgacctg
tcgaagaagatcaccgtcgacgccaagggcgagatcctggagctggtgaccaccgtcaac
acgatggtggaccagctgtcgtcgttcgcggagcaggtgacccgggtggcccgcgaggtg
ggcaccgagggcatcctcggcggtcaggcgcacgtgccgggcgtcacgggcatctggaag
gacctgagcgacaacgtcaacctgatggcgaagaacctcacgacccaggtgcggaacatc
tcccaggtgtccgccgcggtcgccaacggcgacctgacgcgtcaggtcagcatcgaggcg
cgcggcgaggtggcgcagctcgcggacaccatcaacacgatggtgaagacgctgagcgcg
ttcgccgagcaggtcaccaaggtggcccgcgaggtgggtacggacggcatcctgggcggt
caggcgcatgtgccgggtgtggcgggcacgtggaaggacctcaccgagtcggtgaacggc
atggcctccaacctgaccggccaggtccgcaacatcgccatggtcaccacggccatcgcc
aagggtgacctgacgaagaagatcgacatcgacgcgcgcggggagatcctcgagctgaag
acgaccatcaacacgatggtcgaccagctgtcgtcgttcgccgaggaggtcacgcgtgtg
gcccgtgaggtgggcacggagggccagctgggcggccaggcgcgggtgcgggacgtggac
ggcacctggcgggacctgaccgagtcggtgaacgagatggccgggaacctgacgcggcag
gtgcgcgccatcgcgcgcgtggcgaccgcggtgacccgcggcgacctgaacctgaagatc
gacgtggacgcgtccggggagatccaggagctccaggactacatcaacaagatgatcgcc
aacctgcgcgacacgacgatcgccaacaaggagcaggactggctgaagggcaacctggcc
cgcatctcggcgctgatgcagggccggcgtgacctggaggacgtcgcctcgctgatcatg
agtgagctgaccccggtggtgtccgcgcagcacggggcgttcttcctcgcgatgccgctg
gtggacggcgaggacctgaacgcggccgctgaggagcagttcgagctgcggatgctcggc
tcgtacggctactccatggggtcgatgccgacgtcgttccagcccggtgaggggctgatc
gggacggccgcgatggagaagcgcacgatcctggtgggcaaggcgcccagcggctacctg
aagatctcctcggggctcggggaggcgccgccggcccaggtgatcgtgctgcctgtggtg
ttcgaggggaaggtgctcggcgtcatcgagctggcgtcgttcacgccgttcacggcgatc
cagaaggacttcctcaaccagatcgccgagatgatcgcgaccagcgtcaacaccatctcg
gtcaacaccaagaccgagcggctgctggcgcagtcccaggagctcaccgagcaactgcgt
gagcgctcggcggagttggagcagcggcagaaggcactccaggcgtccaacgccgagctg
gaggagaaggccgagctgctggcccgtcagaaccgcgacatcgaggtgaagaacaccgag
atcgaggaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtgtcgatgcgc
tacaagagcgagttcctggcgaacatgtcgcacgagctgcgcacgccgctcaactcgctc
ctgattctggccaagttgctcgcggacaacgcggaggggaacctctcgccgaagcaggtg
gagttcgccgagacgatccacggcgcagggtcggacctgctgcagctcatcaatgacatc
ctcgacctgtcgaaggtcgaggcgggcaagatggacgtctccccgacgcgtatcgcgctg
gtgcagctcgtggactacgtggaggccacgttccggccgctgacggcggagaaggggctg
gacctgtcggtgcggatctcgccggagctgccggccaccctgcacaccgacgagcagcgg
ctgctccaggtgctgcggaacctgctgtccaacgcggtgaagttcaccgactccggatcg
gtcgagctggtcatccggcccgcccgggacgaggtcccgcaggccatccgggagcagctg
ctggaggccggttcgctggccgaccccgacgcggacctgatcgcgttctcggtgagcgac
acgggcatcggcatcgcggccggcaagatgcgggtgatcttcgaggcgttcaagcaggcc
gacggcaccaccagccgcaagtacggtggcacgggcctggggctgtccatctcgcgggag
atcgcgcagctgctcggcggtgagatccacgcgcagagcgagccgggccgcggctcgacg
ttcacgctgtacctgccgctgcacccgagcgagctgccgcccaacggctatcagcagccg
cccatgccggcgctgggggccggggacctggtggcgtcggccgaactgcccgcggcgccg
gaagagaccccggcggaggtgacgtcgtaccgggaggcgcagaacggtccggcggcgctg
ttccggcgccggcgccgggtctcgctccggcaggaccagcggccctccgcggagctggag
gagtggccggccgtcgagcaggaggcgcaggcggcgcgcacgccgcgcaagggcatccgc
ttcggcgggcagaaggtgctgatcgtcgacgacgacatccgcaacgtcttcgccctgacc
agcgtgctggagcagcacggcctgtccgtgctgtacgcggagaacggccgcgagggcatc
gaggtcctggagcagcacgacgacgtggcggtcgtgctgatggacatcatgatgcccgag
atggacgggtacgcgacgaccacggcgatccggcggatgccgcagttcgccgggctgccg
atcatcgcgctcaccgcgaaggcgatgaagggcgaccgggagaaggccatcgagtcgggc
gcctccgactacgtcaccaagccggtcgaccccgatcacctgctgacggtcatggagcag
tggatgaggggggagtga
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