Streptomyces griseoincarnatus: UBV09_25005
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Entry
UBV09_25005 CDS
T11026
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sgro Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgro03009
]
UBV09_25005 (rimO)
Enzymes [BR:
sgro01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
UBV09_25005 (rimO)
Ribosome biogenesis [BR:
sgro03009
]
Prokaryotic type
ribosomal protein modification factors
UBV09_25005 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WPW21736
LinkDB
All DBs
Position
5485790..5487265
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AA seq
491 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVEDAEEADVAVVNTCGFVEAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYANISDRLQTIL
NGGIHAAHTPRDRRKLLPISPAERQDSAAAVALPGHGPADLPDGLAPASGPRAPLRRRLD
GSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGLERVRVSYLQPAEMRPGLIDVLTSTPKVAPYFDLSF
QHSAPDVLRAMRRFGDTDRFLELLDTIRSKAPQAGVRSNFIVGFPGESAADLAELERFLG
HARLDAIGVFGYSDEEGTEAAGYDGKLDEDVVADRLARVSRLAEELVSQRAEERVGETVH
VLVESVDEEEGVYGRAAHQAPETDGQVLLTSGEGLSVGRMVEAKVVGTEGVDLVAEPLFE
GSPARIEEAGR
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactggtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctggcagctcgtcgaggacgccgag
gaagcggacgtcgccgtcgtcaacacctgtggattcgtcgaggccgccaagaaggactcc
gtcgacgccctccttgaggccaacgacctcaagggacatgggagaacccaggcggtcgtc
gccgtcggctgcatggccgagcggtacggcaaggaactcgccgaagcccttcccgaggcc
gacggcgtgctcggcttcgacgactacgcgaacatctccgaccgcctgcagaccatcctg
aacggcggcatccacgccgcccacaccccgcgcgaccggcgcaagctgctgcccatcagc
ccggccgagcggcaggattccgccgccgccgtcgcgctgcccggacacggcccggccgac
ctgcccgacggcctcgcccccgcctcgggcccccgcgcgcccctgcgccgccgcctggac
ggctccccggtcgcctccgtgaagctggcctccggctgcgaccggcgctgctccttctgc
gccatcccctccttccgcggctctttcatctcccgccgccccagcgacgtcctcaacgag
acgcggtggctggccgagcagggcgtgaaggagatcatgctggtctccgagaacaacacc
tcctacggcaaggacctcggcgacatccgcctgctggagtccctgcttcccgaactcgcc
gaggtcgacggcctggagcgggtgcgcgtcagctacctccagccggccgagatgcgcccc
ggcctgatcgacgtgctgacctccacccccaaggtcgccccctatttcgacctgtccttc
cagcactccgcgcccgacgtgctgcgcgccatgcgccgcttcggcgacaccgaccgcttc
ctggagctgctcgacaccatccggagcaaggcgccccaggccggcgtgcgctccaacttc
atcgtcggcttccccggcgagtccgcggccgacctcgccgagctggagcggttcctgggc
cacgcccggctggacgccatcggtgtgttcggctactccgacgaggagggcaccgaggcc
gccggctacgacggcaagctcgacgaggacgtggtcgccgatcggctggcccgcgtgtcc
cggctggccgaggaactcgtctcgcagcgcgcggaggagcgggtaggcgagaccgtgcac
gtcctggtggagtccgtcgacgaggaggagggcgtgtacggccgtgccgcgcaccaggcc
cccgagacggacggccaggtgctgctcacgagcggcgagggactgagtgtcggccgtatg
gtcgaggcgaaggtggtcggcacggaaggtgtcgacctggtggccgagccgctcttcgag
ggctcgcccgcgcgcatcgaggaggcgggcagatga
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