Streptomyces griseoincarnatus: UBV09_25275
Help
Entry
UBV09_25275 CDS
T11026
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UBV09_25275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgro03019
]
UBV09_25275
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_25275
Enzymes [BR:
sgro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UBV09_25275
Messenger RNA biogenesis [BR:
sgro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UBV09_25275
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UBV09_25275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
AAA_30
Pribosyltran
DUF294_C
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
WPW21787
LinkDB
All DBs
Position
complement(5546909..5549074)
Genome browser
AA seq
721 aa
AA seq
DB search
MEHTSNTDLRTAADEVLARLVGDDTGTARLRDDQWRAIEALVAEKHRALVVQRTGWGKSA
VYFVATALLRAQGSGPTVIVSPLLALMRNQVEAAARAGVRARTINSSNSEEWDAIRAEIE
AGDVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
SDLPEGVPVLATTATANARVTADVAEQLGTGGSSDALVLRGPLDRESLSLSVLRLPDAAH
RMAWLADHLDQLPGSGIIYTLTVAVAEEVTAFLRRRGHAVASYTGRTENADRQQAEEDLL
GNKVKALVATSALGMGFDKPDLGFVVHLGSPSSPISYYQQVGRAGRGVRHAEVLLLPGKE
DEAIWEYFASLAFPSEETVRRTLDVLARSERPLSLPALEPLVELRRSRLETMLKVLDVDG
AVKRVKGGWIATGRPWSYDAERYAWVARQRAAEQQAMRDYVSTTDCRMEFLQRQLDDEGA
KPCGRCDNCAGARYTAGASAVALDAARADLGRAGVEVEPRRMWPTGLPAIGVELKGRIPA
GEQAAQGRALGRLSDIGWGNRLRPLLAPRAPDGPVPEDIARAAVGVLADWAKGQGGWAPG
VDDAQPRPVGVVTVASRTRPQLVRSLGSHIAETGRLPLLGAVESTGEQHQLPRSNSAQRL
KALAGALTVPPELAEALARAGGPVLLVDDYTETGWTLAVAARLLRRAGAQGVLPLVLAVQ
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggagcacacgagcaacacggatctccggacagccgccgacgaggtgctcgcccgtctc
gtcggcgacgacacgggcaccgcacggctgcgcgacgaccagtggcgggcgatcgaggcg
ctggtcgccgagaagcaccgagccctggtcgtccagcgcacgggctggggcaagtccgcg
gtgtacttcgtggcgaccgctctgctgcgggcccagggcagcggaccgaccgtgatcgtc
tccccgctcctcgcgctcatgcgcaaccaggtcgaggccgcggcccgcgccggggtccgc
gcccggaccatcaactcttccaacagcgaggagtgggacgccatccgggcggagatcgag
gcgggtgacgtggatgtgctgctggtcagtcccgagcggctgaacaacccggacttccgc
gaccaggtgctgccccggctggccgccgcgaccggtctgctcgtggtcgacgaggcgcac
tgcatctccgactggggccacgacttccgcccggactaccggcggctgcgcacgatgctg
agcgacctgccggagggagtgcccgtcctcgccaccaccgccacggccaacgcccgggtg
accgccgacgtcgccgagcagctcggcacgggcggttcctcggacgcgctggtgctgcgg
ggcccgctggaccgggagagcctcagtctgagcgtgctgcgcctgccggacgcggcacac
cgcatggcctggctcgccgaccacctggaccagctcccggggtcggggatcatctacacg
ctgacggtggccgtggccgaggaggtcaccgcgttcctgcgccggcgcgggcatgcggtc
gcctcatacaccgggcggacggagaacgccgaccggcagcaggccgaggaggacctgctg
ggcaacaaggtgaaggcgctcgtcgccacctccgccctcggtatggggttcgacaagccc
gacctgggcttcgtggtccacctggggtccccgtcgtcgcccatctcctactaccagcag
gtcggccgcgcgggccgcggtgtccggcacgcggaggtgctcctcctgccgggcaaggag
gacgaggcgatctgggagtacttcgcctccctcgccttcccctcggaggagaccgtgcgc
cgcacgctcgacgtgctcgcgcgctctgaacgccccctgtccctccccgcactcgaaccg
ctcgtggagctgcgccgctcccgcctggagaccatgctgaaggtgctcgacgtggacggg
gcggtgaagcgggtcaagggcggctggatcgcgaccggccggccctggtcgtacgacgcc
gagcggtacgcgtgggtggcgcgtcagcgcgcggccgagcagcaggcgatgcgcgactac
gtgtcgacgacggactgccggatggagttcctgcagcggcagttggacgacgagggcgcc
aagccctgcggccgctgcgacaactgcgcgggcgcccgctacacggccggggcctccgcc
gtcgcgctcgacgcggcccgcgccgacctcggccgggccggtgtcgaggtggagccgcgt
cgcatgtggcccaccggactccccgcgatcggcgtggagctgaagggccgtatcccggcg
ggtgagcaggccgctcaggggagggccctcggccggctctcggacatcggctggggcaac
cggctgcgtccgctgctcgcaccgcgggctccggacggacccgtgcccgaggacatcgcc
cgggccgcggtgggcgtgctcgccgactgggccaaagggcagggtggttgggcgccgggg
gtggacgacgcacagccccggccggtcggtgtggtgaccgtcgcctcgcgcacacggccg
cagctcgtccgatcgctcgggtcacacatcgcggagacggggaggctaccgctgctcggg
gcggtggagagcacgggcgagcaacatcagcttccccgcagcaacagcgcgcagcgactc
aaggcgctcgccggtgcgctgaccgtcccgcccgagctcgcggaggcgctcgcgcgggcc
ggaggaccggtgcttctggtggacgattacaccgagacgggctggacactcgcagtcgcg
gcacggctgctgcggcgtgcgggtgcgcagggagtgctgccactggtactggccgtacag
ggctga
DBGET
integrated database retrieval system
