Streptomyces griseoincarnatus: UBV09_25965
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Entry
UBV09_25965 CDS
T11026
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sgro Streptomyces griseoincarnatus
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_25965
Enzymes [BR:
sgro01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
UBV09_25965
DNA repair and recombination proteins [BR:
sgro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
UBV09_25965
Prokaryotic type
UBV09_25965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WPW21909
LinkDB
All DBs
Position
complement(5712732..5714108)
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AA seq
458 aa
AA seq
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MTVSVVLYTADLRLRDHPPLHAALRSSDEVVPLFVRDPGIHAAGFDAPNRRAFLADCLHD
LDASLRHRGGRLVIRSGPVVREVCAVAAACGAAEVHMAAGVTAYAHRREERLREELGAVG
VGLRVHEAVITALAPGAVTPSGSDHYGVFTPYLRRWSRETLRGPLAAPRAVRVPDGVGGE
PPPGRADVSGTSPGLPPGGETAGRDRLARWSRSGGMAAYEDRHDDLAGDATSRLSPYLHF
GTLSAAEAVQRARKQGGPGAEAFVRQLCWRDFHHQVLAARPEASWRDYRTRDDRWRGEEE
AAEDIAAWRDGRTGYPIVDAAMRQLRHEGWMHNRARLLTASFLTKTLYVDWRIGARHFLD
LLVDGDVVNNQLNWQWAAGTGTDTRPHRVLNPTVQAKRFDPDGAYVRRWVPELADVEAGR
IHEPWRLPEDCRDALGYPHPVVDLAEGLARFRRARGRD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtctccgttgtcctctacaccgccgacctgcgtctgcgcgaccaccccccgctg
cacgcggcgctgcggtcctcggacgaggtggtgccgctgttcgtgcgggacccaggcatc
cacgcggccggcttcgacgcgcccaaccggcgggccttcctcgccgactgcctgcacgac
ctcgacgcctcgctgcggcaccgcggcggccggctcgtgatccgctcggggccggtcgtc
cgggaggtgtgcgcggtggccgccgcgtgcggggccgccgaggtgcacatggcggcgggc
gtgacggcgtacgcccaccgccgggaggagcggctgcgcgaggagctcggcgccgtgggc
gtggggctgcgcgtgcacgaggcggtgatcaccgcgctcgcccccggggcggtgaccccg
tccggctcggaccactacggcgtgttcaccccctacctccgccggtggtcgcgggagacc
ctgcgggggcccctcgcggcgccccgtgccgtccgcgtccccgacggggtgggcggtgag
ccgccgcccggccgcgcggacgtgtccggcacctcccccggtctcccgcccggaggggag
acggccggccgggaccggctggcgcggtggtcgcgctccggcggcatggccgcctacgag
gaccggcacgacgacctcgcgggcgacgccacgtcgcggctgtcgccgtacctccacttc
gggacgctctccgcggcggaggccgtccagcgggcacgcaagcagggaggtccgggcgcg
gaggcgttcgtgcgtcagctgtgctggcgggacttccaccaccaggtgctggcggcgcgc
cccgaggcgtcctggcgggactaccgcacccgcgacgaccgatggcgcggcgaggaggag
gccgccgaggacatcgccgcgtggcgggacgggcgcaccggctacccgatcgtcgacgcg
gccatgcggcaactgcggcacgagggctggatgcacaaccgggcgcgcctgctgacggcg
agcttcctgacgaagacgctgtacgtcgactggcggatcggcgcccggcacttcctggac
ctgctggtggacggcgacgtcgtcaacaaccagctcaactggcagtgggccgccggcacg
ggcaccgacacccgcccccaccgggtcctcaaccccacggtccaggccaagcgcttcgac
ccggacggcgcgtacgtacgccgctgggtcccggagctcgcggacgtcgaggccgggcgg
atccacgagccgtggcgcctcccggaggactgtcgcgacgccctcggctacccccaccct
gtggtcgacctcgccgaagggctcgcccgtttccgccgcgcgcggggccgcgactga
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