Streptomyces griseoincarnatus: UBV09_26945
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Entry
UBV09_26945 CDS
T11026
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03030
DNA replication
sgro03430
Mismatch repair
sgro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UBV09_26945
03430 Mismatch repair
UBV09_26945
03440 Homologous recombination
UBV09_26945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgro03032
]
UBV09_26945
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_26945
Enzymes [BR:
sgro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UBV09_26945
DNA replication proteins [BR:
sgro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UBV09_26945
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UBV09_26945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WPW22095
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All DBs
Position
5951849..5952571
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AA seq
240 aa
AA seq
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MGWHRELLIGFDLETTGTDPREARIVTGAVIELRAGETLGRREWLADPGVPIPADAVAVH
GISNERAAAEGRPADQVADAVAGVLAAYWKTGVPVVAYNASFDLSLLSAELRRYGLPSLR
DRLGGADPGPVIDPYTIDRAVDRYRRGKRTLEAVCAEYGVRLDAAHDATADALAAARLAC
AIADRHPKVAALGPAELHRRQIEWYAAWAADFQDFLRRKGDPAALVDGTWPLREPAEEPV
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggagctgctgatcggcttcgacctggagacgacggggacggatccg
cgcgaggcacggatcgtcacgggagccgtgatcgagctccgcgcgggggagacgctgggg
cgccgcgagtggctggccgacccgggcgtgccgatccccgccgacgcggtcgcggtccac
ggcatcagcaacgagcgcgcggccgccgagggccgccccgccgaccaggtggccgacgcc
gtcgccggggtcctggccgcctactggaagaccggcgtcccggtcgtcgcctacaacgcc
tcgttcgacctgagcctgctctccgccgagctgcggcggtacggactgccgtcgctgcgt
gaccgcctgggcggcgccgacccgggcccggtgatcgacccgtacaccatcgaccgcgcc
gtcgaccgctaccgccgaggcaagcgcacgctggaggcggtctgcgcggagtacggcgtc
cgcctcgacgcggcgcacgacgcgacggccgacgccctcgccgccgcccgcctggcctgc
gcgatagccgaccgccacccgaaggtcgcggccctcggcccggcggagctgcaccgccgt
cagatcgagtggtacgcggcctgggcggcggacttccaggacttcctgcgccgcaagggc
gacccggccgccctcgtcgacggcacatggccgctgcgcgagccggcggaggagccggtc
tga
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