Streptomyces griseoincarnatus: UBV09_28295
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Entry
UBV09_28295 CDS
T11026
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UBV09_28295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgro03000
]
UBV09_28295
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_28295
Enzymes [BR:
sgro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
UBV09_28295
Transcription factors [BR:
sgro03000
]
Prokaryotic type
Helix-turn-helix
AraC family
UBV09_28295
DNA repair and recombination proteins [BR:
sgro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UBV09_28295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
WPW23631
LinkDB
All DBs
Position
6247544..6249046
Genome browser
AA seq
500 aa
AA seq
DB search
MHTDTERCVRAVQSKDARFDGWFYTAVLTTGIYCRPSCPAVPPKPEHMVFHPSAAACQQA
GFRACKRCRPDTSPGSPEWNVRADLVARTMRLIADGVVDREGVTGLAARLGYSTRQIERQ
LFAELGAGPLALARAQRAQTARLLVETTGLPMADVAFAAGFSSVRTFNDTVREVFALSPS
ELRTRAPKHAAAATPGVITLRLPFRAPLHPDNLFGHLAATAVPGVEEWTSHSPEGVGGAP
VGAYRRTLRLPYGHGIVALAPRPDHIACRLALSDPRDLTVAISRCRRLLDLDADPVAVDE
QLRADPALAPLVDKAPGRRVPRTVDEAEFAVRAVLGQQVSTAAARTHAARLVTAHGTPVD
DPEGGLTHLFPAPEHLAALDPDALAMPRTRRATLTTLVRRLADGDLRLGADSDWPETRAA
LLALPGFGPWTADVIAMRALGDPDAFLPTDLGVRRAAGALGLPSTPSALTTRAAAWRPWR
AYAVQYLWATDSHPINVLPA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccgacaccgagcgctgcgtgcgcgccgtgcagtcgaaggacgcgcggttcgac
ggctggttctacaccgccgtcctcaccaccggcatctactgccggcccagctgccctgcg
gttccgcccaagccggagcacatggtgttccacccgagcgccgcggcctgccagcaggcc
ggattccgggcgtgcaagcgctgccgccccgacaccagccccggctcccccgagtggaac
gtacgcgccgacctcgtcgcccgcaccatgcggctgatcgccgacggcgtcgtggaccgc
gagggcgtcaccggactcgccgcccgcctcggctacagcacccggcagatcgaacgccag
ctgttcgccgaactgggagcgggccccctcgccctggcccgcgcccagcgggcgcagacg
gcgcggctgctcgtcgagacgaccggcctgccgatggcggacgtcgccttcgcggccggc
ttctcctccgtgcgcaccttcaacgacaccgtgcgcgaggtgttcgcgctctccccgagc
gagctgcgcacccgggcaccgaaacacgcggccgccgccacgcccggggtgatcacgctg
cgcctgccgttccgcgccccgctccaccccgacaacctcttcggccacctcgccgccacc
gccgtacccggcgtcgaggagtggacctctcacagccccgaaggcgtgggcggtgccccc
gtcggcgcctaccgccgcacgctgcgcctcccgtacggccacggcatcgtcgccctggcc
ccgcgccccgaccacatcgcctgccggctcgccctgagcgacccgcgggacctgaccgtc
gccatcagccgctgccgccgcctgctcgacctcgacgcggacccggtcgcggtggacgag
cagctgcgcgccgaccccgcgctcgcgcccctggtcgacaaggcgcccggccgccgggtg
ccgcgcacggtcgacgaggcggagttcgccgtgcgcgcggtcctcggacagcaggtgtcc
acggccgccgcccgcacccacgcggcccgcctggtcaccgcgcacggcacacccgtcgac
gatcccgagggcggcctcacccacctcttcccggcaccggagcacctggccgcgctcgac
ccggacgccctcgccatgccccgcacccggcgtgccaccctgaccaccctggtccgccgg
ctcgccgacggcgacctccgcctgggcgccgacagcgactggcccgagacccgcgcggca
ctcctcgccctccccggcttcggcccctggaccgccgacgtcatcgccatgcgcgccctc
ggcgaccccgacgccttcctccccaccgacctcggcgtccgccgcgccgccggcgccctg
ggcctcccgtccaccccgtccgccctcaccacccgggcagccgcctggcgcccctggcgc
gcgtacgccgtccagtacctctgggcgaccgacagccacccgatcaacgtcctgccggcc
tga
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