Streptomyces griseoaurantiacus: V9K83_07735
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Entry
V9K83_07735 CDS
T10677
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sgrs Streptomyces griseoaurantiacus
Pathway
sgrs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
V9K83_07735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrs03021
]
V9K83_07735
Transcription machinery [BR:
sgrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V9K83_07735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HC2
Sigma70_r1_1
CDC27
Motif
Other DBs
NCBI-ProteinID:
WWY84094
LinkDB
All DBs
Position
complement(1816586..1818124)
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AA seq
512 aa
AA seq
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MSASTSRTLPPEIAESVSVMALIERGKAEGQIAGDDVRRAFEADQIPATQWKNVLRSLNQ
ILEEEGVTLMVSAAEPKRTRKSVAAKSPAKRTATKTVAAKPVTSKKAAAPAAPVAPEAPT
AAPADDEAPAKKAAAKKTTAKKAAAKKTATKKTAAKKTTSKKDEAEPGEEETLEETPKGA
DEPEGTESAGFVLSDEDEDDAPAQQVAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKR
IEAGLFAEDKLASADKLAPKLKRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGML
FLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVI
NKLARVQRQMLQDLGREPTPEELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFG
DLIEDSEAVVPADAVSFTLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVY
GVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggccagcacatcccgtacgctcccgccggagatcgccgagtccgtctctgtcatg
gcgctcatcgagcggggaaaggctgaggggcagatcgccggcgacgatgtgcgtcgggcc
ttcgaagctgaccagattccggccactcagtggaagaacgtactgcgcagcctcaaccag
atcctcgaggaagagggtgtgacgctgatggtcagtgccgcggagcccaagcgcacccga
aagagcgtcgcagcgaagagtccggccaagcggaccgccaccaagacggtcgcggcgaag
ccggtgacctcgaagaaggccgccgcccccgctgcccccgtcgctccggaggcgcccacc
gccgctcccgccgacgacgaggcccccgccaagaaggcggccgcgaagaagacgacggcc
aagaaggcggccgcgaagaagaccgccaccaagaagacggctgccaagaagaccacgtcc
aagaaggacgaggccgagccgggcgaggaagagacgctcgaggagacccccaagggcgcc
gacgagcccgagggcaccgagagtgccgggttcgtcctctccgacgaggacgaggacgac
gcccccgcgcagcaggtcgccgcggccggcgccaccgccgacccggtcaaggactacctc
aagcagatcggcaaggtcccgctgctcaacgccgagcaggaggtcgaactcgccaagcgc
atcgaggccggcctgttcgccgaggacaagctggcgagcgccgacaagctggcccccaag
ctcaagcgcgagctcgagatcatcgccgaggacggccgccgcgccaagaaccacctcctg
gaggccaacctccgcctggtggtctccctggccaagcgctacaccggccgcggcatgctg
ttcctggacctgatccaggagggcaacctcggtctcatccgcgcggtcgagaagttcgac
tacaccaagggctacaagttctccacgtacgccacgtggtggatccgccaggcgatcacc
cgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatggtcgaggtcatc
aacaagctcgcgcgcgtccagcgccagatgctccaggacttgggccgcgagcccaccccg
gaggagctggccaaggaactcgacatgacccccgagaaggtcatcgaggtccagaagtac
ggccgcgagcccatctccctgcacaccccgctcggcgaggacggcgacagcgagttcggt
gacctcatcgaggactccgaggcggtcgtcccggccgacgccgtgagtttcacgctcctc
caggagcagctgcactccgtactcgacacgctctccgagcgcgaggcgggcgtggtctcc
atgcggttcggcctcaccgacggccagccgaagacgctcgacgagatcggcaaggtgtac
ggggtcacccgtgagcgcatccgccagatcgagtcgaagacgatgtcgaagctgcgccac
ccttcccgctcccaggtcctgcgcgactacctcgactag
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