Streptomyces griseoaurantiacus: V9K83_07785
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Entry
V9K83_07785 CDS
T10677
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgrs Streptomyces griseoaurantiacus
Pathway
sgrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V9K83_07785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgrs03019
]
V9K83_07785
03400 DNA repair and recombination proteins [BR:
sgrs03400
]
V9K83_07785
Enzymes [BR:
sgrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V9K83_07785
Messenger RNA biogenesis [BR:
sgrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
V9K83_07785
DNA repair and recombination proteins [BR:
sgrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
V9K83_07785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
RecQ_Zn_bind
Pribosyltran
AAA_22
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
WWY84104
LinkDB
All DBs
Position
complement(1831685..1833844)
Genome browser
AA seq
719 aa
AA seq
DB search
MDTLELRAEADAVLAELVGAPKDAARLREDQWQAVAALVEEHRRALVVQRTGWGKSAVYF
VATALLRRRGSGPTVIISPLLALMRNQVEAAERAGIRARTINSANPEEWETIYGEVERGE
TDVLLVSPERLNSVDFRDQVLPRLAATTGLLVVDEAHCISDWGHDFRPDYRRLRTMLAEL
PADVPVLATTATANARVTADVAEQLGTGGGDALVLRGPLDRESLRLGVLELPNAAHRLAW
LGERLGDLPGSGIIYTLTVAAAEEVAAFLRQRGHPVASYTGKTENADRLQAEEDLLANRV
KALVATSALGMGFDKPDLGFVVHLGSPSSPIAYYQQVGRAGRGVDHADVLLLPGREDEAI
WAYFASVGFPPEEQVRRTLAVLEEAGRPLSLPALEPLVDLRRSRLETMLKVLDVDGAVQR
VKGGWTATGRPWVYDAERYAWVAKQRAAEQQAMRDYVASTGCRMEFLQRQLDDDRAVPCG
RCDNCAGPWLEAAVSPASLAQATGELDRPGVEVEPRKMWPTGLAAVGMDLKGRIPPGQQA
SPGRALGRLSDIGWGNRLRPLLSAQAPDGPVPDDVLNAVVTVLADWARSPGGWAGGGPDA
AARPVGVVALPSRARPRLVTTLAEGVARIGRLPYLGSLAHTPAAQEHTAHRSNSAQRLRA
LADSFTVPDDLAAALAATPGPILLVDDYTDSGWTLAVGARLLRRAGAAEVLPLVLALAG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggacaccctggaactgcgcgccgaagccgatgccgtcctcgccgagctggtcggcgct
ccgaaggacgcggcccggctgcgggaggaccagtggcaggcggtggcggccctggtggag
gagcaccggcgcgctctcgtggtgcagcgcaccggctggggcaagtcggccgtgtacttc
gtcgccaccgcgctgctgcgacggcgcggctcgggccccacggtgatcatctcgccgctc
ctcgcgctgatgcggaaccaggtcgaggccgcggaacgggcgggcatccgggcccgcacg
atcaactcggccaaccccgaggagtgggagacgatctacggcgaggtcgagcgcggtgag
accgacgtcctcctcgtgagccccgaacgcctcaactccgtggacttccgcgatcaggtg
ctgccccggctcgcggccaccacgggcctgctcgtggtcgacgaggcgcactgcatctcc
gactggggccacgacttccggcccgactatcgcaggctgcgcacgatgctggccgaactc
ccggccgatgtgccggtcctggccaccaccgcgaccgccaacgcccgggtcacggcggac
gtcgccgagcagctgggcacgggaggcggggacgcgctggtgctgcgcgggccgctggac
cgggagagcctgcggctgggagtgctggaactgccgaacgcggcgcaccggctggcgtgg
ctgggggagcgcctcggtgacctgccgggctcggggatcatctacacgctgacggtggcg
gcggcggaggaggtcgccgccttcctgcggcagcgcggtcatccggtggcctcctacacg
gggaagaccgagaacgccgaccggctgcaggccgaggaggacctgctggcgaaccgggtg
aaggccctggtcgccacctccgccctcggcatgggcttcgacaaaccggacctcggcttc
gtggtgcacctgggctcgccctcctccccgatcgcctactaccagcaggtgggccgtgcg
gggcgcggcgtggaccacgcggacgtactgctgctgccgggccgggaggacgaggcgatc
tgggcgtacttcgcctcggtgggcttcccgcccgaggagcaggtgcggcgcacgctggcc
gtgctggaggaggcgggtcggcccctgtcgctgccggcgctggagccgctggtggacctc
cggcgctcacgcctggagacgatgctgaaggttcttgacgtggacggcgccgtccagcgc
gtcaagggcggctggaccgccaccgggcggccgtgggtctacgacgcggagcgctacgcc
tgggtcgcgaagcagcgggcggccgagcagcaggccatgcgggactacgtggcgagcacc
gggtgccggatggagttcctgcagcggcagctcgacgacgaccgggcggttccctgcgga
cgctgcgacaactgcgccgggccgtggctggaggcggccgtctcgcccgcgtccctcgcg
caggcgacgggcgagctggaccggccgggggtcgaggtcgaaccgcgcaagatgtggccg
acgggactcgccgcggtcggcatggacctcaagggccgcattcccccggggcagcaggcg
agccccgggcgcgccctcggcaggctgtcggacatcggctggggcaaccggctgcggccc
ctcctctcggcgcaggcgccggacgggccggtcccggacgacgtgctgaacgccgtcgtg
accgtgctggcggactgggcccgctcgcccggtggctgggccggtggcggccccgacgcg
gcggcacggcccgtgggtgtcgtcgccctgccctcccgcgcccgcccgcgactcgtcacc
accctggccgagggcgtggcacggatcggcaggctcccgtacctcggcagcctggcccat
acccccgcggcccaggagcacaccgcgcaccgcagcaactccgcccagcggctgcgcgcc
ctcgccgactccttcaccgtgcccgacgacctcgccgccgccctggctgccactcccgga
ccgatcctgctcgtcgacgactacaccgactccggctggaccctggccgtcggggcacgc
ctcctgcgccgggccggtgccgccgaggtgctccccctcgtcctcgcgctggccgggtag
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