Streptomyces griseoaurantiacus: V9K83_10565
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Entry
V9K83_10565 CDS
T10677
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgrs Streptomyces griseoaurantiacus
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrs03021
]
V9K83_10565
Transcription machinery [BR:
sgrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V9K83_10565
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
Sigma70_ECF
NirdL-like_HTH
MarR_2
HTH_24
PF0610-like_N
IF2_N
HTH_3
HTH_Crp_2
DUF7343
MarR
HTH_AraC
HTH_ParB
HTH_28
Motif
Other DBs
NCBI-ProteinID:
WWY84619
LinkDB
All DBs
Position
2481913..2483076
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AA seq
387 aa
AA seq
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MTNGDGPVQDEERGTRKPPAGGDGGPVGPSRAAEGIDGIPEQARPHPEDESSAVGLPVGG
QRGQAGVTRGAPASASVGVFPVPAGPGARGRVTGQTMSEHERNGNAEQGVREAPQPTEAP
QRAEHAPQHGQHTRHDPTDRSGARAMFVELRSLAAGSPEYAELRNRLVRMHLPLVEHLAR
RFRNRGEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRV
PRRLQELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVP
DTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFANMTQSQIAQE
VGISQMHVSRLLARTLAQLREKLLVEE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaacggggacgggccggtgcaggacgaagagcgcggcacacggaaaccgcccgcc
ggaggcgacggcggcccggtcgggccgtcgcgcgcggcggaaggcatcgacggcatcccc
gagcaggcccggccgcatccggaggacgagtcgtccgcggtcggcctcccggtcggcggg
cagcgggggcaggcgggcgtcacgcgcggcgcgcccgcgtcggcctcggtcggggtcttc
cctgtcccagcgggaccgggagctcggggaagggtgacgggccagacgatgagcgagcac
gagcggaacgggaacgccgagcagggcgtgcgggaggccccgcagcccacggaggccccg
cagcgcgcggagcacgccccgcagcacgggcagcacacgcggcacgaccccacggaccgc
agcggcgcgcgggcgatgttcgtcgaactgcgttccctggcggcgggcagcccggagtac
gcggagctgcgcaaccggctggtccggatgcatctgccgctcgtggagcacctcgcccgc
cggttccgcaaccgcggcgagccgctggacgacctcacgcaggtcgccaccatcgggctg
atcaagtcggtcgaccggttcgacccggaccggggcgtggagttctccacgtacgcgacg
cccacggtggtcggcgagatcaagcggcacttccgcgacaagggctgggcggtgcgcgtc
ccgcgccggctgcaggagctgcgcctggcgctcaccacggccaccgcggaactctcccag
ctgcacggccgctcccccacggtgcacgagctggccgagaagctggccatctccgaggaa
gaggtcctggagggtctggagtccgccaacgcgtactccacgctgtcgctggacgtcccc
gacaccgacgacgagtccccggcggtcgcggacacgctcggcgcggaggacgaggcgctg
gagggcgtcgagtaccgggagtcgctcaagccgctgctggaggacctcccgccgcgcgag
aagcggatcctgctgctgcggttcttcgcaaacatgacccagtcgcagatcgcccaggag
gtcggcatctcccagatgcacgtctcccgcctgctggcccgcaccctggcccagctgcgg
gagaagctgctggtggaggagtag
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