Streptomyces griseoaurantiacus: V9K83_10855
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Entry
V9K83_10855 CDS
T10677
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgrs Streptomyces griseoaurantiacus
Pathway
sgrs03420
Nucleotide excision repair
sgrs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V9K83_10855
03430 Mismatch repair
V9K83_10855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgrs03400
]
V9K83_10855
Enzymes [BR:
sgrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V9K83_10855
DNA repair and recombination proteins [BR:
sgrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V9K83_10855
MMR (mismatch excision repair)
Other MMR factors
V9K83_10855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
AAA_30
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
WWY84670
LinkDB
All DBs
Position
complement(2544248..2547982)
Genome browser
AA seq
1244 aa
AA seq
DB search
MPARITDPEQLKELLGIPFTPEQTACIIAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALVRAGVTDPDAIDPDNPPGEPLISTYHAFAGRLL
TDHGLRIGLEPTSRLLADATRYQLAARVLREAPGPYPALTRSFPDLVSDLLALDSELAEH
LVRPTEVQAFDAELLDTLAGVRLGNADLRKVPEAAAARRSLAGLVERYRAAKRERDLLDF
GDQIALSAALSGLPEVGRILREEFRVVLLDEYQDTSVAQRVLLSGLFGGGSGHPVTAVGD
PCQAIYGWRGASVANLDDFPAHFPHADGRPAARQALSENRRSGGRLLDLANGLAAPLRAM
HAGVEALRPAPGAEREGQVRCALLRTHAEEIGWIAESIAHLVRTGKEPGEIAVLCRTAGD
FAEIQGALVARDVPVEVVGLSGLLHLPEVADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVSHTRVDEDDPDVRLAAAVEGVDPTEVVSLADALDTFLELPMEAGH
EDDGLPFSSDARVRFARLAAELRDLRRSLADPLMDVLHRVLAVTGLEVELSASPHALAAR
RRETLANFLDVAASFAANEPETSLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHKS
KGLEWDVVAVPGLVTGTFPSTQGREKWTAQGKVLPHPLRGDAATLPEVESWDSRGLRGFH
EAMKEHQLTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLVALYAHCAAGHGE
IEAWAEPPAEGEENPALLAASADHAWPLPLDEAALARRRAAAETVLAHLEHTASLASASA
AEAAAPRAAHDPFTHEDPDWPPPDEEPPYDPDEEPPYGPPDDDPLDGLPEEEPFPGPPEE
GDEDGYVYADHEEEPGGGTGSRSVGRPADRPVVPHQAPPPGTQSGPERIPHSRTADVPGG
TPLTPEEARTLASWDRDLDALTGELLRARAGVTEVVLPASLTASQLMRLAEDPDGLAQEL
ARPMPRPPQPAARRGTRFHAWVESRFEALRLPMLEPDELPGTEAEIADERDLEALKEAFA
RTPYAHRTPYRVEAPFQIGIAGRVVRGRIDAVYREGEGGTARYEIVDWKTNRAPTADPLQ
LAVYRLAWAEQRGVPLERVTAAFVYVRRGEVVRPPDLPGRAELERLLGAGESGVPAAGEP
RTAIRDGRRYEDGTETITGVPETLTDGVRPPTDEPPGGDVGAGR
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgtatcaccgaccccgagcagctcaaggagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcatcgcgccgcccgccccgcaggtgatcgtcgccggagcc
ggttcgggcaagacgacggtgatggccgcgcgcgtggtgtggctggtcggcaccggccag
gtcgcgcccgaacaggtgctcgggctgacgttcaccaacaaggccgcgggcgaactcgcc
gagcgcgtccgcaaggccctggtcagggccggcgtcacggaccccgacgcgatcgacccc
gacaacccgcccggcgaaccgctgatctccacctaccacgccttcgccggccgcctgctg
accgaccacgggctgcgcatcggcctggagcccacctcgcggctcctcgccgacgccacc
cgctaccagctcgccgcccgcgtgctgcgcgaggcccccggcccctaccccgcgctcacc
cggtccttccccgacctcgtcagcgacctgctggcactggactccgaactcgccgagcac
ctggtgcgccccacagaggtgcaggcgttcgacgccgagctcctcgacaccctggcgggc
gtccggctcggcaacgccgacctgcgcaaggtccccgaggcggccgccgcccgccgctcc
ctggccgggctggtggagcgctaccgcgccgcgaagcgcgagcgggacctgctcgacttc
ggcgaccagatcgccctctcggccgccctctcgggcctgcccgaggtcgggaggatcctg
cgcgaggagttccgtgtggtgctgctcgacgagtaccaggacacctcggtcgcgcagcgg
gtcctgctctccgggctcttcgggggcggcagcgggcaccccgtcaccgccgtcggcgac
ccctgccaggcgatctacggctggcgcggcgcctccgtcgccaacctggacgacttcccc
gcacacttcccgcacgccgacggccgccccgccgcccgccaggccctcagcgagaaccgg
cgcagcggcggccgactcctggacctcgccaacggtctcgccgcgcccctgcgcgcgatg
cacgcgggcgtggaggcgctgcgcccggccccgggcgccgaacgcgaggggcaggtgcgc
tgcgccctgctgcgcacccatgccgaggagatcggctggatcgccgagtcgatcgcccac
ctggtgcgcaccggcaaggagcccggcgagatcgcggtcctgtgccgcacggcgggcgac
ttcgccgagatccagggcgccctcgtcgcccgggacgtgcccgtggaggtcgtcggcctg
tccgggctgctccacctgcccgaggtggcggacctcgtcgccgtctgcgaggtgctccag
gaccccggcgccaacgcctccctggtccgtctgctcaccggcccccgctggcgcatcggc
ccccgcgacctggcgctgctcggacgccgcgcccgcctgctcgtgtcccacacccgcgtg
gacgaggacgaccccgatgtgcggctcgccgccgccgtcgagggcgtcgacccgacggag
gtcgtctcgctcgcggacgccctcgacaccttcctcgaactgcccatggaggccggacac
gaggacgacggactgccgttctcctccgacgcgcgcgtccggttcgcccggctcgccgcc
gaactgcgcgacctgcgccgctcgctggccgacccgctgatggacgtgctgcaccgcgtg
ctcgccgtcaccggcctggaggtcgagctgtccgcctccccgcacgccctggccgcccgc
cgccgggagaccctcgccaacttcctggacgtcgccgcctccttcgcggccaacgaaccc
gagacgagcctgctcgccttcctcggtttcctgcgcaccgccgcgcagtacgagaaaggc
ctggacaacgcgctgcccggtggcgagaacaccgtcaaggtgctcaccgcgcacaagtcc
aagggtctggaatgggacgtcgtcgccgttcccggactggtcaccggcaccttcccgagc
acccagggccgcgagaagtggaccgcccagggcaaggtgctgccgcacccgctgcgcggc
gacgcggccacgctccccgaggtggagtcctgggactcccggggactgcgcggcttccac
gaggcgatgaaggagcaccagctcaccgaggagctgcgcctcgggtacgtcacgttcacc
cgcccgcgttcgctgctgctcggctccggccactggtggggcccgtcgcagaagaagccc
cgcggcccctccgacttcctcgtggccctgtacgcgcactgcgcggccgggcacggcgag
atcgaggcctgggcggagccgccggccgagggcgaggagaacccggccctgctcgcggcc
tccgccgaccatgcctggccgctgccgctggacgaggccgcgctggcccgccgccgggcc
gccgccgagaccgtcctggcacacctggagcacacggcctccctcgcgtccgcgtccgcc
gcggaggccgccgcaccgcgggccgcgcacgacccgttcacgcacgaggacccggactgg
cccccgccggacgaggagccgccgtacgacccggacgaggagcccccgtacgggccgccg
gacgacgaccccctcgacggcctgcccgaggaggagcccttccccggtccgcccgaggag
ggggacgaggacgggtacgtgtacgccgaccacgaggaggagccggggggcgggaccggc
tcccggtccgtcggccgcccggcggaccgccccgtcgtgccccaccaggcaccacccccc
gggacgcagtccggcccggaacggatcccgcactcgcgcaccgcggacgtgcccggcggc
acaccgctcacccccgaggaggcccgcacgctggcttcctgggaccgcgacctcgacgcg
ctcaccggagagctgctgcgggcccgcgcgggcgtcaccgaggtcgtcctcccggcctcg
ctgaccgcctcgcagctcatgaggctggccgaggacccggacgggctggcacaggagctt
gcccgcccgatgccccggcctccgcagcccgcggcccgccggggcacccggttccacgcc
tgggtcgaaagcaggttcgaggcgctgcggctgccgatgctggaacccgacgagctgccg
ggcaccgaggccgagatcgccgacgagcgcgatctggaggcactcaaggaggcattcgcc
cgcacgccctacgcccaccgcaccccgtaccgggtggaggcgcccttccagatcggcatc
gccggacgcgtcgtacggggccgcatcgacgcggtctaccgcgagggcgagggcgggacg
gcgcggtacgagatcgtcgactggaagaccaaccgggcgcccaccgccgacccgctgcag
ctcgccgtgtaccggcttgcctgggccgagcagcggggtgtgcccctggagcgggtcacg
gcggcgttcgtgtacgtgcgccggggcgaggtcgtacggccgccggacctgccggggcgg
gccgaactggagcggctgctgggcgccggggagagcggcgtgccggccgccggggagccc
cggacggcgatccgggacgggaggcggtacgaggacggcaccgaaacgatcaccggcgta
cccgaaacgctcaccgacggtgtccggccgcccaccgacgaaccgccgggaggggatgtc
ggcgcaggccgttag
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