Streptomyces griseoaurantiacus: V9K83_16985
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Entry
V9K83_16985 CDS
T10677
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgrs Streptomyces griseoaurantiacus
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgrs03021
]
V9K83_16985
Transcription machinery [BR:
sgrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V9K83_16985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
GerE
HTH_3
MarR
DUF7343
NirdL-like_HTH
DUF134
Motif
Other DBs
NCBI-ProteinID:
WWY88865
LinkDB
All DBs
Position
complement(3894973..3895902)
Genome browser
AA seq
309 aa
AA seq
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MTVSASTAPPQEELPAPAPAPTSAPAPATATTAIPTTPPAPPAAVPGPTPQDAQKRRGAD
TRALTQVLFTQLKDLEPGSPEHDRVRGALIEANLPLVRYAAARFRSRNEPMEDVVQVGTI
GLINAIDRFDPERGVQFPTFAMPTVVGEIKRYFRDNVRTVHVPRRLHELWVQVNSATEDL
TTAFGRSPTTAEIAERLRIGEEEVLSCIEAGRSYHATSLEAAQEGDGLPGLLDRLGYEDP
ALDGVEHRDLVRHLLVQLPEREQRILLLRYYSNLTQSQISAELGVSQMHVSRLLARSFAR
LRSANRIEA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgtgtcggccagtactgcgccgccccaggaagagcttccggcccccgcccccgcc
cccacgtccgctcccgcaccggccaccgcgaccaccgcgatcccgaccaccccgcccgcc
ccgcccgccgccgtgcccggccccacgcctcaggacgcgcagaagcgccggggcgccgac
acccgggcactgacccaggtgctcttcacccagctcaaggacctggagccgggctccccc
gaacacgaccgcgtgcgcggggcgctcatcgaggcgaacctccccctcgtgcgctacgcg
gccgcgcgcttccgctcccgcaacgagccgatggaggacgtcgtccaggtcggcaccatc
gggctgatcaacgcgatcgaccgcttcgaccccgagcggggcgtgcagttcccgaccttc
gcgatgccgaccgtcgtcggagagatcaagcgctacttccgggacaacgtccgcaccgtg
cacgtcccgcgccggctgcacgagctgtgggtgcaggtgaacagcgcgaccgaggacctc
accaccgccttcgggcgctccccgaccaccgccgagatcgccgagcggctgcggatcggc
gaggaggaggtgctctcctgcatcgaggccggccgctcgtaccacgcgacctcgctggag
gcggcccaggagggcgacgggctgcccggcctgctggaccggctgggctacgaggacccc
gcgctcgacggcgtcgagcaccgcgacctcgtgcggcatctgctcgtccagctccccgag
cgcgagcagcggatcctgctgctccgctactacagcaacctcacgcaatcgcaaatcagt
gcggagctgggagtctcccagatgcacgtctcccggctcctcgcgcgcagcttcgcgcga
ctgcggtccgcgaatcgcatcgaggcctga
DBGET
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