Streptomyces griseoaurantiacus: V9K83_24625
Help
Entry
V9K83_24625 CDS
T10677
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgrs Streptomyces griseoaurantiacus
Pathway
sgrs03030
DNA replication
sgrs03430
Mismatch repair
sgrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V9K83_24625 (dnaE)
03430 Mismatch repair
V9K83_24625 (dnaE)
03440 Homologous recombination
V9K83_24625 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgrs03032
]
V9K83_24625 (dnaE)
03400 DNA repair and recombination proteins [BR:
sgrs03400
]
V9K83_24625 (dnaE)
Enzymes [BR:
sgrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V9K83_24625 (dnaE)
DNA replication proteins [BR:
sgrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V9K83_24625 (dnaE)
DNA repair and recombination proteins [BR:
sgrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V9K83_24625 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WWY87133
LinkDB
All DBs
Position
5624308..5627847
Genome browser
AA seq
1179 aa
AA seq
DB search
MSNKPFTHLHVHTQYSMLDGAARLKDMFDACNEMGMTHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIRWGQPHQKRDDVSGSGGYTHKTIWAADAGGLHNLFRL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEALKSAADYQD
IFGKDRYFLELMDHGIDIEHRVREGLLEIGKKLGIPPLVTNDSHYTYAHEASAHDALLCI
QTGKNLSDPDRFKFDGTGYYLKSADEMYAIDSSDAWQEGCRNTLLVAEQIDTTGMFEKRD
LMPKFDIPEGYTEVTWFKEEVRRGMERRFPGGIPEDRQKQVEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVAYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIDLNGITDPTHPRYSEAGEVRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSETITEHVPVWVRHTDGVTITQWDYPSCESLGLLKMDFLGLRNLTIMDDAVKMVKS
NKGRDIDLLSLPLDDPTTFELLQRGDTLGVFQFDGGPMRSLLRLMKPDNFEDISAVSALY
RPGPMGMDSHTNYALRKNGLQEITPIHPELEAPLKEVLDVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPDELAKNFTIFQAGAKKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTAFLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPNVNES
ESNFAAQGDDVILFGLSAVRNVGTNVVDSIIRSRKAKGKYASFPDYLDKVEAVVCNKRTT
ESLIKAGAFDSMGHTRKGLTAQYEPMIDNVVAVKRKEAEGQFDLFGGMGEGDTSEPGFGL
DVEFSPDEWDKTYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGDFGDGAVV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSLECMFFPATYQLVSTQLVEDAVVFVKGRL
DKREDVPRLVAMELQVPDLSNAGTNAPVVLTIPATRVTPPMVSRLGEILSHHKGDSEVRI
KLQGPRKTTVLRLDRHRVKPDPALFGDLKVLLGPACLAG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaacaagccgttcacgcacctgcacgtccacacccagtactcgatgctggacggt
gccgcgcggctgaaggacatgttcgacgcgtgcaacgagatgggcatgacgcacatcgcc
atgtccgaccacggcaacctgcacggggcctacgacttcttccactcggcgaagaaggcg
ggcgtcacgccgatcatcggcatcgaggcgtacgtcgcccccgagtcccggcgcaacaag
cgcaagatccgctggggtcagccgcaccagaagcgggacgacgtgtccggttcgggtggt
tacacccacaagacgatctgggcggccgacgcgggcgggttgcacaacctcttccgcctg
tcctccgacgcctacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atctcccagtggtccgaggggctcatcgcctccaccggctgcccctcgggcgagctgcag
accaggctgcgtctcggccagttcgacgaggccctgaagtcggccgccgactaccaggac
atcttcggcaaggaccgctacttcctggagctgatggaccacggcatcgacatcgagcac
cgggtccgcgagggcctgctggagatcggcaagaagctcggcatcccgcccctggtcacc
aacgactcgcactacacgtacgcgcacgaggcgagcgcccacgacgcactgctgtgcatc
cagaccggcaagaacctctcggaccccgaccgcttcaagttcgacggcaccggctactac
ctgaagtccgcggacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacaccctcctggtggccgagcagatcgacaccacgggcatgttcgagaagcgcgac
ctgatgccgaagttcgacatccccgagggctacaccgaggtcacctggttcaaggaggag
gtgcgccgcggcatggagcgccgcttccccggcggcatccccgaggaccgccagaagcag
gtcgagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtgggccccggccgtggctcc
gcggccggctcgatcgtcgcctacgccatgggcatcaccgacctcgacccgatcccgcac
ggtctgatcttcgagcggttcctcaaccccgagcgcgtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatccggtacgtcacggagaagtacggcgcc
gacaaggtcgccatgatcggcacctacggcaagatcaaggccaagaacgccatcaaggac
tccgcacgcgtcctcggctacccgtacgcgatgggcgaccgcatcaccaaggcgatgccc
gccgacgtcctcggcaagggcatcgacctcaacggcatcaccgaccccacgcacccgcgc
tacagcgaggccggcgaggtccgcgggatgtacgagaacgagccggacgtgaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggcgtgcacgcggccggc
gtgatcatgtccagcgagaccatcaccgagcacgtgcccgtctgggtccggcacaccgac
ggcgtgaccatcacgcagtgggactacccgagctgcgagtcgctcggcctgctgaagatg
gacttcctcggcctgcgcaacctgacgatcatggacgacgccgtcaagatggtgaagtcc
aacaagggccgcgacatcgacctgctgtcgctgccgctggacgaccccacgaccttcgaa
ctgctccagcgcggcgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcctgatgaagcccgacaacttcgaggacatctccgccgtctccgcgctgtac
cggcccggccccatgggcatggactcgcacaccaactacgcgctgcgcaagaacggcctg
caggagatcaccccgatccaccccgagctggaggcgccgctcaaggaggtcctggacgtc
acctacggcctgatcgtgtatcaggagcaggtgcagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgccgcgtcatgggcaagaagaagcccgacgaa
ctggcgaagaacttcaccatcttccaggccggcgccaagaagaacggctacagcgacgag
gcgatccaggcgctgtgggacgtgctggtccccttcgccggctacgccttcaacaaggcg
cactccgccgcgtacggcctggtctcgtactggaccgccttcctgaaggccaactacccg
gccgagtacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtccgcggtc
tacctcaacgagtgccgccgcatgggcatcaaggtgctcccgcccaacgtcaacgagtcg
gagtcgaacttcgccgcccagggcgacgacgtgatcctcttcggcctctccgcggtgcgc
aacgtcggcaccaacgtggtcgactcgatcatcaggagccgcaaggcgaaggggaagtac
gcctccttcccggactacctcgacaaggtcgaggccgtcgtctgcaacaagcggaccacg
gagtcgctcatcaaggccggcgccttcgactcgatggggcacacccgcaaggggctcacc
gcccagtacgagccgatgatcgacaacgtggtcgcggtcaagcgcaaggaggccgagggc
cagttcgacctcttcggcggcatgggcgagggggacaccagcgagccgggcttcggactc
gacgtggagttctcccccgacgagtgggacaagacctacctgctcgcccaggagcgggag
atgctcggcctgtacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccagctgaccggcggcgacttcggggacggcgcggtcgtc
accatcggcggcatcatctccggactccagcgcaagatgaccaagcagggcaacgcctgg
gcgatcgccaccgtcgaggacctcgcaggctccctggagtgcatgttcttcccggcgacg
taccagctcgtgtcaacccaactggtcgaggacgccgtggtgttcgtcaagggccggctc
gacaagcgggaggacgtgccccggctggtcgcgatggagctccaggtgcccgacctgtcg
aacgcgggcaccaacgcgcccgtggtgctcaccatcccggccaccagggtcaccccgccg
atggtcagccgcctcggcgagatcctcagtcatcacaagggcgacagcgaggtgcggatc
aagctccagggaccccgcaagaccacggtgctccggctggaccggcaccgggtgaagccg
gaccccgcgctcttcggcgacctcaaggtgctgctcggcccggcctgcctggcgggttga
DBGET
integrated database retrieval system
