Streptomyces griseochromogenes: AVL59_02470
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Entry
AVL59_02470 CDS
T04729
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_02470
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_02470
Enzymes [BR:
sgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AVL59_02470
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Topoisomerases
AVL59_02470
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AVL59_02470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
ANP48584
UniProt:
A0A1B1APW2
LinkDB
All DBs
Position
526084..528915
Genome browser
AA seq
943 aa
AA seq
DB search
MSPTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPEKYTGE
VRRLGVDVEHDFQPIYVVNADKKAQVKKLKDLLKDSDELFLATDEDREGEAIAWHLQEVL
KPKIPVKRMVFHEITKEAIREAVANPRQLNQKLVDAQETRRILDRLYGYEVSPVLWKKVM
PRLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDPSDPSSLVARLQTVD
GRRVAQGRDFDSVGQLKTANTLHLDEANARALAAALENTRFSVRSVESKPYRRSPYAPFR
TTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSDTAIAAARAQVTQLYGA
DYLPPQPRTYAAKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFKLYELIWKRTVASQMK
DATGNSVTVKIGGTAADGRDVEFSASGKTITFHGFLKAYVEGADDPNAELDDRERRLPQV
GEGDPLSAEEITVDGHATKPPARYTEASLVKELEEREIGRPSTYASIIGTILDRGYVFKK
GTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAQAVPWLKRFYFGEGT
VAGAAEAGNGDGDHLGGLKELVTDLGAIDAREVSSFPVGSDIVLRVGRYGPYIERGEKDT
EQHQRADIPDDLAPDELTVELAEELLAKPSGDFELGTDPETGHAIVAKDGRYGPYVTEIL
PEGTPKTGKNAVKPRTASLFKSMSLDTVTLEDALKLMSLPRVVGTDADGVEITAQNGRYG
PYLKKGTDSRSLQTEDQLFTITLEEAQAIYAQPKQRGRAAAKPPLKELGADPVSGKPVVV
KDGRFGPYVTDGETNATLRSGDSVETITPERGFELLAEKRAKGPAKKTAAKKAPAKKAAP
AKKTAAKKTAAKKTTAAAKKTTAKKTTAKKATASKATASGAED
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcgcct
gccaaggcgaagacgatcaagggctacctgggccccggctacgtagtcgaagcgagcgtc
gggcacatccgcgaccttcccaacggcgccgccgaggtgccggagaagtacaccggcgag
gtccgccgcctcggtgtggacgtcgaacacgacttccagccgatctatgtggtcaacgcc
gacaagaaggcgcaggtcaagaagctcaaggacctgctgaaggactccgacgagctcttc
ctcgccaccgatgaggaccgggagggcgaggcgatcgcctggcacctccaggaggtcctc
aagccgaagatcccggtcaagcggatggtcttccacgagatcaccaaggaggcgatccgc
gaggccgtcgccaacccgcgccagctcaaccagaagctggtcgacgcccaagagacccgc
cgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtcatg
ccgcgcctgtcggcagggcgtgtccagtcggtggccacccgtctcgtcgtcgagcgggaa
cgcgagcgcatcgccttccgctccgccgagtactgggacctgacgggaaccttcgcgacc
ggccgcgccggtgacccgagcgacccgtcgtccctggtcgcccgtctccagaccgtcgac
ggccggcgcgtcgcccagggccgcgacttcgactccgtgggacagctcaagaccgcgaac
accctgcacctcgacgaggcgaacgcccgcgccctcgccgccgccctggagaacacccgc
ttctccgtgcggtccgtcgagtccaagccgtaccgccgctcgccgtacgcgccgttccgt
acgacgacgctgcagcaggaagccagccgcaagctcggcttcggcgcgaaggccacgatg
caggtcgcgcagaagctgtacgagaacggctacatcacgtacatgcgtacggactccacg
acgctgagcgacaccgccatcgcggccgcccgcgcccaggtcacgcagctgtacggcgcc
gactacctgcccccgcagccacgcacctacgccgccaaggtgaagaacgcccaggaggcg
cacgaggcgatccgtccctcgggtgatcgtttccgcaccccggcggagaccggcctgacc
ggcgaccagttcaagctctacgagctgatctggaagcggaccgtggcctcccagatgaag
gacgcgaccggcaacagcgtgaccgtgaagatcggtggcacggccgccgacggccgcgac
gtcgagttcagcgcctccggcaagacgatcaccttccacggtttcctgaaggcctatgtc
gagggtgccgacgacccgaacgccgagctggacgaccgcgagcgccggctgccgcaggtg
ggtgagggcgacccgctgtccgccgaggagatcacggtcgacggccacgccaccaagccg
ccggcccgctacaccgaggcctccctggtcaaggagctggaagagcgcgagatcggccgc
ccgtcgacgtacgcgtcgatcatcggcacgatcctcgaccgcggctacgtgttcaagaag
ggcacggccctggtgccgtccttcctgtcgttcgccgtggtcaacctcctggagaagcac
ttcgggcggctcgtcgactacgacttcaccgccaagatggaggacgacctcgaccgcatc
gcccgtggtgaggcgcaggccgtgccgtggctgaagcggttctacttcggcgagggcacg
gtcgcgggtgcggccgaggccggcaacggcgacggcgaccacctcggcggcctcaaggaa
ctggtcaccgacctgggcgcgatcgacgcgcgcgaggtgtcctcgttcccggtgggcagc
gacatcgtgctgcgggtcggccgctacggcccctacatcgagcgcggcgagaaggacacc
gagcagcaccagcgcgccgacatcccggacgacctggcgccggacgagctgaccgtcgag
ctggccgaggaactgctggccaagccgagcggcgacttcgagctgggcaccgaccccgag
accgggcacgcgatcgtcgccaaggacggccgctacggcccgtacgtcacggagatcctc
cccgagggcaccccgaagacggggaagaacgcggtcaagccgcgcacggcctcgctcttc
aagtcgatgtcgctggacacggtgaccctggaggacgcgctcaagctgatgtcgctgccg
cgcgtcgtcggcaccgacgccgacggcgtggagatcaccgcgcagaacggccgctacggc
ccgtacctgaagaagggcacggactcgcgctcgctgcagaccgaggaccagctgttcacg
atcacgctggaggaggcgcaggcgatctacgcccagccgaagcagcggggccgcgcggcc
gccaagccgccgctgaaggagctgggcgcggacccggtctccggcaagccggtcgtggtc
aaggacggccgcttcggtccgtacgtcaccgacggcgagaccaacgcgaccctgcgctcc
ggcgacagcgtggagacgatcaccccggagcgcggcttcgagctgctcgccgagaagcgg
gcgaagggtcccgccaagaagacggcggcgaagaaggccccggccaagaaggccgctccg
gcgaagaagaccgcggccaagaagacggcggcgaagaagacgaccgcggccgcgaagaag
accacggcgaagaagacgacggccaagaaggcgacggcttcgaaggcgaccgcctccggc
gcggaggactga
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