Streptomyces griseochromogenes: AVL59_03020
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Entry
AVL59_03020 CDS
T04729
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_03020
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AVL59_03020
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
AAA_22
AAA_16
AAA
AAA_14
ABC_tran
nSTAND3
DUF7125
NACHT
NTPase_1
DUF7129
AAA_5
AAA_24
PAXNEB
Rad51
AAA_29
MCM
RsgA_GTPase
AAA_30
MMR_HSR1
RecA
SLFN-g3_helicase
DAP3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ANP48679
UniProt:
A0A1B1AQ20
LinkDB
All DBs
Position
complement(643597..645006)
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AA seq
469 aa
AA seq
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MAARTKTTKDRPSYRCTECGWQTAKWLGRCPECQAWGTIDEYGTPAVRTTAPGRVTTSAV
PIGQVDGRQATARTTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKSASAEH
KTLYVTGEESASQVRLRADRIGALDDHLYLAAETDLAAILGHLDEVKPSLLILDSVQTVA
SPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGAIAGPRLLEHLVDVVLHF
EGDRHARLRLVRGVKNRYGATDEVGCFELHDEGITGLADPSGLFLTRRDEPVPGTCLTVT
LEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYSAT
VGGVKLSEPAADLAVALALASAASDVPLPKNLVAIGEVGLAGEVRRVTGVQRRLSEAHRL
GFTHALVPGDPGKIPPGMKVLEVADIGDALRVLPRSRRREAPREAEDRR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtaccaagaccaccaaggaccgcccgtcctaccgctgcaccgagtgcggc
tggcagacggccaagtggctcggccgctgccccgagtgccaggcctggggcacgatcgac
gagtacggcacgcccgcggtccgtacgacggcacccggccgcgtcacgacgtccgcggtg
cccatcggccaggtcgacggccggcaggccaccgcccgcacgaccggcgtgccggagctg
gaccgggtgctcggcggcggtctcgtccccggcgcggtcgtcctgctcgccggcgagccg
ggcgtcggcaagtccaccctgctgctggacgtggccgccaagtcggcgagcgcggagcac
aagaccctctacgtgaccggcgaggagtccgcgagccaggtacggctgcgcgccgaccgc
atcggcgccctcgacgaccacctctatctggccgccgagaccgacctggctgccatcctc
ggccacttggacgaggtgaagccctcccttctgatcctcgactcggtgcagacggtggcc
tccccggagatcgacggcgcgccgggcggcatggcccaggtccgcgaggtggccggggcc
ctgatccgcgcctccaaggagcgcgggatgtccacgctgctggtgggccacgtcaccaag
gacggcgcgatcgccggcccccggctgctggagcacctggtggacgtggtgctgcacttc
gagggcgaccggcacgcgcgtctgcgcctggtgcgcggcgtgaagaaccgctacggcgcc
acggacgaggtcggctgcttcgaactgcacgatgagggcattacgggccttgccgacccg
agcggacttttcctgacccgtcgtgacgaaccggttcccggcacctgcctgacggtcacc
ctggagggccgccgccccttggtggccgaggtccaggcgctgaccgtggactcccagatc
ccctccccgcgccgcaccacctcgggcctggagacctcccgcgtgtcgatgatgctcgcg
gtgctggagcagcgcggccggatcagcgcgctcggcaagcgggacatctactccgcgacc
gtcggtggcgtgaagctctccgagccggccgccgacctcgccgtcgcgctcgcgctcgcc
tcggccgcgagcgacgtcccgctgccgaagaacctggtcgcgatcggcgaggtgggtctg
gcgggcgaggtcagacgggtcacgggcgtgcagcgcaggctctccgaggcgcaccggctc
ggcttcacgcacgcgctcgtgccgggcgatccgggcaagatcccgcccggcatgaaggtc
ctggaagtggccgacataggggatgcgctgagggtgctgccgcgctcccgtcgccgagag
gccccacgggaggcggaggaccgccggtag
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