Streptomyces griseochromogenes: AVL59_06660
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Entry
AVL59_06660 CDS
T04729
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03420
Nucleotide excision repair
sgs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVL59_06660
03430 Mismatch repair
AVL59_06660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_06660
Enzymes [BR:
sgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVL59_06660
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVL59_06660
MMR (mismatch excision repair)
Other MMR factors
AVL59_06660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ANP49317
UniProt:
A0A1B1ARZ7
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All DBs
Position
1418900..1422475
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AA seq
1191 aa
AA seq
DB search
MPARITDPEQLKELLGIPFTPEQTACITAPPAPQVIVAGAGSGKTTVMAARVVWLVGTGQ
VAPEQVLGLTFTNKAAGELAERVRKALIKAGVTDPDAIDPDNPPGEPVISTYHSFAGRLL
TDHGLRIGLEPTSRLLADATRYQLAARVLREAPGPYPALIRSFADLVSDLLALDSELAEH
LVDPARLRTWDAGLLHTLEGAKLTNADLRKVPEAAAARRELADLVVRYRAAKRERDLLDF
GDQIALSARLAGIPDVGRLLREEFRVVLLDEYQDTSVAQRVLLSGLFGGGTGHPVTAVGD
PCQAIYGWRGASVANLDDFPEHFAHADGRPATRQALSENRRSGGRLLDLANGLAEPLRAL
HAGVEALRPAPGAERDGTVRCALLRTHAEETDWIADSIAHLVHTGKAPGEIAVLCRTATD
FAEIQAALVARDIPVEVVGLSGLLHLPEIADLVAVCEVLQDPGANASLVRLLTGPRWRIG
PRDLALLGRRARLLVAHARAGDTDDPDRRLAEAVEGVDPSEVISLADALDTFLESPLDED
ADDDGLPFSPDARVRFARLATELRDLRRCLSDPLMDVLHRVLAVTGLEVELSASPHALAA
RRRETLSNFLDIAASFAAGDGEATLLAFLGFLRTAAQYEKGLDNALPGGENTVKVLTAHK
SKGLEWDVVVVPGLVKGTFPSAQGREKWTAQARVLPHALRGDRDTLPDAGTWDSRGMKAF
HEAMKEHQHTEELRLGYVTFTRPRSLLLGSGHWWGPSQKKPRGPSDFLQALHDHCAAGYG
EIEAWADEPAEDEENPALHTATADQVWPLPLDDAALARRRAAAETVLAHLDTLAARQDSH
PPATHDPDTFDDPDWPSPPDDEDPHAGEYPYGEDGPYGEDGPYGEDFPYDEDSYADDAAP
QPEEPGDWDSWGAGRPAVPHQAPPPADPAHLRPRAREDTTEGSLKVTPEVTPEEARTIAS
WDRDLDALTGELQRSRQSGTDVPLPTTLTASQLLRLAEDPDGLAQELARPMPHPPQPAAR
RGTRFHAWVEARFEELTLPMLEPDELPGSEAEIADEHDLEALKDAFERTDYAHRTPYRVE
APFQLTLAGRVVRGRIDAVYKNGDGHGATYEIVDWKTSRSRTADPLQLAVYRLAWAEQQG
VPPESVTAAFLYVRSGETVHPEGLPDRAALERLLRGDDPGDTEGVRGASRV
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcccgtatcaccgaccccgagcagctcaaagagctcctcggcatcccgttcacc
ccggagcagacggcctgcatcaccgcgccgcccgccccgcaggtgatcgtggccggagcc
gggtcgggcaagaccaccgtgatggcggcccgagtggtctggctggtcggcaccgggcag
gtcgcccccgaacaggtcctgggcctgaccttcaccaacaaggccgcaggcgaactcgcc
gaacgcgtccgcaaggcgctgatcaaggccggcgtgaccgaccccgatgccatcgacccg
gacaacccgcccggcgagccggtcatctcgacgtaccactccttcgccggccgtctgctg
accgaccacggcctgcgcatcggcctcgaacccacctcccggctgctggccgacgcgacc
cgctaccagctcgccgcgcgcgtgctgcgcgaagcccccggcccctaccccgcgctcatc
cgttccttcgccgacctcgtcagcgacctcctcgccctcgactccgaactcgccgaacac
ctcgtggaccccgcccggctgcgcacctgggacgccggcctgctgcacaccctggagggc
gccaagctcaccaacgccgacctgcgcaaggtccccgaggccgcggccgcccgccgcgaa
ctcgccgacctcgtcgtgcgctaccgcgccgccaaacgcgaacgcgacctgctcgacttc
ggcgaccagatcgccctgtccgcccgtctcgccggcatccccgacgtgggccggctgctg
cgcgaggagttccgtgtggtgctcctggacgagtaccaggacacctccgtggcccagcgc
gtcctgctgtcgggcctgttcggcggcggtacgggccacccggtcaccgccgtgggcgac
ccctgccaggccatctacggctggcgcggtgcctccgtcgccaacctggacgacttcccc
gagcacttcgcccacgccgacggccgccccgccacccgccaggcgctcagcgagaaccgc
cgcagcggcggccgcctcctcgacctcgccaatggcctcgccgagcccctgcgcgccctg
cacgcgggcgtggaggccctgcgcccggcccccggcgccgagcgcgacggcacggtccgc
tgcgccctgctgcgcactcatgccgaggagaccgactggatcgccgactccatcgcccac
ctcgtccacaccggcaaggcccccggcgagatcgccgtactgtgccgcacggcgaccgac
ttcgccgagatccaggccgccctcgtcgcccgcgacatccccgtcgaggtcgtcggcctg
tccgggctgctgcacctgcccgagatcgccgacctcgtcgccgtctgcgaagtcctccag
gaccccggggccaacgcctcgctggtccgcctgctgaccggcccgcgctggcgcatcggc
ccccgcgacctcgccctcctcggccgccgcgcccgactgctggtcgcccacgcgcgcgcg
ggcgacaccgacgaccccgaccgccggctcgccgaggccgtcgaaggggtcgacccgtcc
gaggtgatatcgctcgcggacgccctggacacgttcctggaaagccccctggacgaggac
gcggacgacgacgggttgccgttctccccggacgcgcgcgtgcgcttcgcccgcctcgcc
accgaactgcgtgacctgcgccgttgcctgtccgacccgctgatggacgtcctgcaccgc
gtcctcgcggtcaccggcctggaggtggagctgtcggcgtccccgcacgccctggccgcc
cgccgccgcgagaccctctccaacttcctggacatcgccgcctccttcgcggccggcgac
ggcgaggccacactgctggccttcctcggattcctgcgcaccgccgcccagtacgagaag
ggcctcgacaacgccctgcccggcggcgagaacaccgtcaaggtcctcaccgcgcacaag
tccaagggtctggagtgggacgtcgtcgtcgtgccgggactggtcaagggcaccttcccg
agcgcccagggccgcgagaagtggaccgcgcaggccagggtgctgccgcacgccctgcgc
ggcgaccgcgacaccctgcccgacgcgggcacctgggactcccggggcatgaaggccttc
cacgaggcgatgaaggagcaccagcacaccgaggaactccgcctcggctacgtcaccttc
acccgcccccgctccctcctcctcggctcgggccactggtgggggccgagccagaagaag
ccgcgcggcccctccgacttcctccaggccctccacgaccactgcgccgccgggtacggc
gagatcgaggcgtgggccgacgagcccgccgaggacgaggagaacccggccctgcacacg
gccaccgccgaccaggtgtggccgctgcccctggacgacgcggcgctggcccgccgccgc
gcggccgccgagaccgtcctcgcccacctggacaccctggccgcccgccaggacagccac
ccgcccgccacccacgaccccgacaccttcgacgaccccgactggccctcaccgccggac
gacgaggacccccacgcgggggagtatccgtacggcgaggacggtccgtacggcgaggac
ggtccgtacggcgaggacttcccgtacgacgaggattcgtacgccgacgatgccgccccg
cagccggaggagcccggagactgggactcctggggcgccggccggccggccgtacctcac
caggcgccgccccccgccgaccccgcgcatttgcggccccgtgcccgcgaggacaccaca
gaaggcagcctcaaggtcacccctgaggtcacccctgaggaggcccgcaccatcgcttcc
tgggaccgcgacctcgacgcgctcaccggcgagctgcagcgctcccggcagagcggcacg
gacgtcccgctgcccaccacactgaccgcgtcccagttgctgcgtctcgccgaggacccg
gacgggctcgcgcaggaactcgcgcgccccatgccgcaccctccgcaacccgccgcgcgc
cggggcacccgatttcacgcctgggtcgaagcgcgcttcgaggaattgactctgcccatg
ctggagcccgacgagctgcccggcagcgaagccgagatcgccgacgaacacgacctggaa
gcgctcaaggacgccttcgaacgcaccgattacgcccaccgcactccctaccgcgtcgag
gcgcccttccagctcaccctcgccggccgggtcgtacgcgggcggatcgacgccgtctac
aagaacggcgacggccacggagccacctacgagatcgtcgactggaagaccagccgctcc
cgcaccgccgaccccctccagctcgccgtgtaccggctggcctgggccgagcagcagggc
gtgccgcccgaatcggtcacggccgccttcctgtacgtgcgcagcggcgagaccgtacat
cccgagggactgccggaccgggcagccctggagcggctgctcaggggagacgacccgggc
gacacggagggcgtacgcggggcgagccgagtgtga
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