Streptomyces griseochromogenes: AVL59_06680
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Entry
AVL59_06680 CDS
T04729
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03420
Nucleotide excision repair
sgs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVL59_06680
03430 Mismatch repair
AVL59_06680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_06680
Enzymes [BR:
sgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVL59_06680
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVL59_06680
MMR (mismatch excision repair)
Other MMR factors
AVL59_06680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Viral_helicase1
C1_1
DUF6011
Zn_ribbon_TiaS
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
ANP56342
UniProt:
A0A1B1BC83
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All DBs
Position
1425626..1427764
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AA seq
712 aa
AA seq
DB search
MLEGLDPEQREVATALHGPVCVLAGAGTGKTRAITHRIAYGVHAGILQPSSVLAVTFTNR
AAGEMRGRLRQLGANGVQARTFHSAALRQLQYFWPKAIGGSMPRLIDRKFQLVADAAATC
NLRLDRGELRDAMAEIEWSKVTQTIPADYPYAVAKADREAPRDPVEIAHLYAAYEDLKRD
RAVIDFEDVLLLTVAVLQDRHDIAEQVRAQYQHFVVDEYQDVSPLQQRLLELWLGDRDSL
CVVGDASQTIYSFTGATPDHLLDFRLRHPGATVVKLVRDYRSTPQIVHLANGLLTQARGR
AADHRLELVSQRPAGPEPVYAEYTDEPAEAEGAARRIRELIDAGVPAAEIAVLFRTNSQS
ETYEQALADAGVPYQLRGAERFFDRPEVRKAGIALRGAARFGGNDSLLDDVVDLPSQVRA
VLSGEGWTSEPPAGSGAARERWESLAALVSLAHDFAAARPGATLGDFVAELDERANAQHA
PTVQGVTLASLHAAKGLEWDVVFLVGIAEGMMPITYAKTDEQVEEERRLLYVGVTRARER
LHLSWALSRSPGGRPNRRPSRFLDGLRPGSTATVGRTGTAATGGIERGALAGAPAVRRRT
QRTPARCRVCGRTLTDAGEMKLMRCEDCPSDMDEGLYERLREWRAVQAEHSGQPDFCVFT
DRTLMAIAEARPDSPAELSRIPGVLSRKLQRYGTDVLAICAGQEGVEGDESD
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaagggctcgaccccgagcagcgcgaggtggccaccgccctgcacggcccggtg
tgcgtcctcgccggagcgggcaccggcaagacccgggcgatcacccaccgcatcgcctac
ggagtacacgcaggcatcctccagccgtccagcgtgctcgctgtcaccttcaccaaccgg
gccgcaggcgagatgcgcggccgcctgcgccagctcggcgccaacggcgtacaggcccgt
accttccactccgccgcactgcgccagctccagtacttctggccgaaagcgatcggcggc
tccatgccccggctcatcgaccgcaagttccagctcgtcgccgacgcggccgccacctgc
aacctccgcctcgaccgcggcgagctgcgcgacgccatggccgagatcgaatggtccaag
gtcacccagaccatccccgccgactacccgtacgcggttgcgaaggccgaccgcgaggcc
cctcgcgacccggtcgagatcgcccacctctacgccgcctacgaagacctcaagcgcgac
cgggcggtcatcgacttcgaggacgtcctgctgctcaccgtcgccgtcctccaggaccgg
catgacatcgccgagcaggtccgcgcccagtaccagcacttcgtcgtcgacgaataccag
gacgtcagccccctgcagcagcggctgctggaactgtggctcggcgaccgcgacagcctg
tgcgtcgtcggcgacgccagccagacgatctactcattcacaggagcaacgcccgaccac
ctcctcgacttccgcctccgtcaccccggcgccaccgtcgtcaagctggtccgcgactac
cgctccaccccccagatcgtccacctcgccaacggtctgctcacccaggcccgcggacgc
gccgccgaccaccggctggaactggtctcccagcgccccgccggccccgaacccgtctac
gccgagtacaccgacgagcccgccgaagccgagggcgccgcccgccgcatccgcgaactg
atcgacgccggcgtccccgccgccgagatcgccgtcctcttccgcaccaactcccagtcc
gaaacctacgaacaagccctcgccgacgccggcgtcccctaccagctgcgcggcgccgag
cgcttcttcgaccgccccgaagtgcgcaaggccggcatcgccctgcgcggcgccgcccgc
ttcggcggcaacgactccctgctcgacgacgtcgtcgacctcccctcacaagtacgtgcc
gtgctgtccggagagggctggaccagcgagccaccggccggctccggcgccgcgcgagaa
cgctgggaatccctggccgccctggtcagcctcgcccacgacttcgccgccgcccggccg
ggagccaccctcggcgacttcgtggccgagctcgacgaacgggcgaacgcgcaacacgcc
ccgaccgtccagggcgtcaccctggcctccctccacgcggccaagggcctggagtgggac
gtcgtcttcctggtcggcatcgccgagggcatgatgccgatcacgtacgccaagacggac
gaacaggtcgaggaagaacgccgcctcctctacgtcggcgtgacccgtgcccgagaacgc
ctccacctctcctgggcgctgtcccgctcacccggcggccgccccaaccgcaggcccagc
cgtttcctcgacggcctgcgccccggctccaccgccaccgtcggacgcaccgggacggca
gccaccggaggcatcgaacgcggcgccctcgccggcgccccggccgtccgtcggcgtacc
cagcgcaccccggcccgctgcagggtctgcggccgcacactcaccgacgcgggcgaaatg
aagctgatgcgctgtgaggactgcccctcggacatggacgaaggcctctacgagcggctg
cgcgagtggcgggccgtccaggcggagcacagcggacagccggacttctgcgtcttcacc
gaccggaccctgatggccatcgccgaagcccggcccgacagcccggccgaactctctcgc
atccccggcgtcctcagccgcaagctgcagcgctacggaaccgacgttctggccatctgc
gcaggccaggagggtgtggaaggcgacgagagcgactga
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