Streptomyces griseochromogenes: AVL59_09165
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Entry
AVL59_09165 CDS
T04729
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K02405
RNA polymerase sigma factor FliA
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs02020
Two-component system
sgs02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AVL59_09165
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AVL59_09165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_09165
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sgs02035
]
AVL59_09165
Transcription machinery [BR:
sgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AVL59_09165
Bacterial motility proteins [BR:
sgs02035
]
Flagellar system
Flagellar assembly proteins
Stator
AVL59_09165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_31
UPF0122
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ANP49757
UniProt:
A0A1B1AT83
LinkDB
All DBs
Position
1983751..1984593
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AA seq
280 aa
AA seq
DB search
MPQHTSGSDRAAIPPAARDGGSVRPPAPSTLDELWRSYKATGDDRLREQLILHYSPLVKY
VAGRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDIDREIKFETYAITRIRGAMIDELRAL
DWIPRSVRQKARNVERAYATLEARLRRTPTEGEVAAELGMEVDELHAVFSQLSLANVVAL
EELLHVGGEGGDRLSLMDTLEDTAADNPVEVAEDRELRRFLARAINTLPEREKTVVTLYY
YEGLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLASFGR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtccgaccgggcggcgatccccccagccgcccgcgacggt
ggcagcgtgcggccgcccgctccctcgacgctcgacgaactgtggcggtcgtacaaggcg
acgggggacgaccggctgcgggagcagctgatcctgcactactcgccgctcgtcaagtac
gtggcgggccgggtcagcgtcggtctgccgcccaacgtggagcaggccgacttcgtctcc
tcgggggtgttcgggctgatcgacgcgatcgagaagttcgacatcgaccgtgagatcaag
ttcgagacgtacgcgatcacccggatccggggcgcgatgatcgacgagctgcgggcgctg
gactggatcccccggtcagtccggcagaaggcgcgcaatgtcgagcgggcctacgccacg
ctggaggcgcggctgcggcgcaccccgaccgaaggcgaggtcgccgccgagctgggcatg
gaggtcgacgaactgcacgccgtgttcagccagttgtcgctggccaacgtggtggccctg
gaggagctgctgcacgtcggcggcgagggcggggaccggctcagcctcatggacacgttg
gaggacaccgccgccgacaatccggtggaggtggccgaggaccgggagctgaggcggttc
ctggcccgggcgatcaacacgctgcccgagcgggagaagaccgtcgtcacgctctactac
tacgaggggctcaccctcgcggagatcggcaacgtgctcggggtcaccgagagccgggtc
agccagatccacaccaagtcggtgctgcagttgcgggcgaagctggcgagcttcgggcgc
tga
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