KEGG   Streptomyces griseochromogenes: AVL59_09605
Entry
AVL59_09605       CDS       T04729                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
sgs  Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:sgs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sgs03016]
    AVL59_09605
Enzymes [BR:sgs01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     AVL59_09605
Transfer RNA biogenesis [BR:sgs03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    AVL59_09605
 Prokaryotic type
    AVL59_09605
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: ANP49835
UniProt: A0A1B1ATF8
LinkDB
Position
2092429..2093334
AA seq 301 aa
MTQKHTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTVRLGQNTVTDDAEGEITSSTDASKVTRDAIDAGIAKLTGDIMQV
PSKVSAIKIDGVRSYKRAREGEDFEIPARPVTVSAFTVYDVRDAVAEDGTAVLDLVVSVV
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKIDSAKTLDQLQAELTVMPIAEAAA
AAFPRWDVDAKRSRLLLNGVRLEMPEEYAGAGAVAVFDPEGRFLALVEEHKGKAKSLAVF
G
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacccagaagcacaccacgcccgacggcctcgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtggtcgccaagatgcgcggcatcgcgcgcacccgccgcgtcggccac
gccggcaccctcgacccgatggcgaccggcgtcctcgttctcggggtggagcgcgccacc
aagctcctcgggcatctcgccctgaccgagaaggagtacctgggcaccgtccggctcggc
cagaacaccgtcaccgacgacgccgagggggagatcacctcctccaccgacgcgtccaag
gtgacccgggacgccatcgacgccggcatcgccaagctgaccggcgacatcatgcaggtc
ccgtccaaggtcagtgccatcaagatcgacggcgtgcggtcgtacaagcgggcccgcgag
ggcgaggacttcgagatccccgcccggccggtgaccgtctccgccttcaccgtgtacgac
gtgcgggacgccgtcgccgaggacggcaccgccgtgctcgacctggtggtctcggtggtc
tgctcctccggcacctacatccgtgccctcgcccgcgacctgggcgccggcctcggcgtc
ggcggccacctcaccgcgctgcgccgcacccgcgtcgggccgtacaagatcgactccgcg
aagacgctggaccagctccaggccgagctgaccgtcatgccgatcgccgaggcagccgcg
gccgcgttcccccgctgggacgtggacgccaagcgctcccggctgctactcaacggcgtc
cggctggagatgcccgaggagtacgcgggggcgggtgccgtcgccgtcttcgaccccgag
ggccgcttcctcgcactggtcgaggagcacaagggcaaggcgaagagcctggccgtcttc
ggctga

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