Streptomyces griseochromogenes: AVL59_10390
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Entry
AVL59_10390 CDS
T04729
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_10390
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_10390
Enzymes [BR:
sgs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AVL59_10390
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Topoisomerases
AVL59_10390
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AVL59_10390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ANP49962
UniProt:
A0A1B1ATW0
LinkDB
All DBs
Position
complement(2410894..2413353)
Genome browser
AA seq
819 aa
AA seq
DB search
MARRSTKTPPPDDSYEEKILDIDVVDEMRGSYLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGVRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRMAEATSLMTESIDEDTVDFTPNYDGQEQEPVALPSAFPNLLV
NGSSGIAVGMATNMPPHNLREVIAAARHLIRHPNADLDALMKHVPGPDLPTGGRVVGLDG
IRDAYATGRGTFKMRATVSIETVTARRKGLVVTELPFTVGPEKVIAKIKDMVNAKKIQGI
ADVKDLTDREHGLRLVIEIKNGFVPEAILEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFDVVRRRSEFRRGKRRDRLHLVEGLLTALIDIDEVIRLIRSSENSAQAKQ
RLMERFSLSEVQTQYILDTPLRRLTKYDRIELEAEKDRLIQEIEELTRILESDTELRKLV
SAELAAVAKQFGTDRRTVLLESAGAPVAAVPLQVADDPCRVLLSSTGLLARTAGDEPFPE
DADAHRTKHDVIVSAVPATTRGEIGAVTSAGRLLRVNVVDLPQLPRTATLPNLSGGAPLA
EFVSLEDDETVVCLTTLDESSPGLALGTEQGVVKRVVPDYPSNKDELEVITLKEGDRIVG
AMELRTGEEDLVFITDDAQLLRFQASIVRPQGRPAGGMAGIKVAEGAKVISFTAVDPAAD
AVVFTVAGSRGTLDDSVQTTAKLTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPVP
ARAAQKNGTPAELPDADPRRDGSGTSLAKTVSVVAGPVF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgactcgtacgaggagaagatcctc
gacatcgacgtcgtggacgagatgcgtggctcctaccttgagtacgcgtactcggtcatc
tactcgcgcgccctgccggacgcccgcgacggtctcaagccggtgcaccgccggatcgtg
taccagatgaacgagatgggcgtgcgccccgaccgcggctatgtgaagtgcgcgcgcgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccctg
gtgcgcatggcccagccgttctcgatgcgcgtcccgctggtcgacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggatggcc
gaggcgaccagcctgatgaccgagtcgatcgacgaggacacggtcgacttcacgcccaac
tacgacggccaggagcaggagccggtggcgctgccctccgccttcccgaacctgctggtg
aacggctcctcgggcatcgcggtcggcatggcgacgaacatgccgccgcacaacctgcgc
gaggtcatcgccgccgcccgccacctgatcagacacccgaacgcggacctggacgcgctg
atgaagcacgtcccgggccccgacctgcccaccggcggccgggtcgtcggcctggacggc
atccgcgacgcgtacgcgaccggccgcggcaccttcaagatgcgcgcgacggtctcgatc
gagaccgtgaccgcccgccgcaagggcctggtcgtcaccgaactgcccttcacggtcggt
ccggagaaggtgatcgccaagatcaaggacatggtcaacgcgaagaagatccagggcatc
gccgatgtcaaggacctcaccgaccgtgagcacggcctgcgtctggtcatcgagatcaag
aacggcttcgtgccggaggcgatcctggagcagctgtacaagctgaccccgatggaggag
tccttcggcatcaacaacgtggccctggtggacggccagccgctcaccctgggcctgaag
gagctgctggaggtctacctcgaccaccgcttcgacgtggtgcggcgccgcagcgagttc
cgccgcggcaagcgccgggaccggctgcacctggtcgagggcctgctgaccgcgctgatc
gacatcgacgaggtcatccggctgatccggtccagcgagaactccgcgcaggccaagcag
cgcttgatggagcggttctcgctgagcgaggtccagacgcagtacatcctcgacacgccg
ctgcgccgactcaccaagtacgaccgcatcgagctggaggcggagaaggaccggctcatc
caggagatcgaggagctgacccggatcctggagtcggacacggagctgcgcaagctcgtc
tcggccgaactggccgccgtggccaagcagttcggcaccgaccggcgcacggtcctgctg
gagtcggccggtgccccggtcgccgccgtgccgctccaggtcgccgacgacccgtgccgg
gtgctgctgtcctcgacgggcctgcttgctcgcacggcgggcgacgagccgttcccggag
gacgccgacgcgcatcgcaccaagcacgacgtgatcgtctccgcggtcccggcgaccacg
cgcggcgagatcggcgcggtgacctcggcgggccgtctgctgcgggtcaacgtggtcgat
ctgccgcagctgcctcggacggcgaccctgccgaacctctccggaggggctccgctggcg
gagttcgtctccctggaggacgacgagacggtggtgtgcctgaccacgctggacgagtcg
tccccgggtctggcgctcggaaccgagcagggtgtcgtcaagcgtgtggtgcccgactat
ccgtccaacaaggacgagttggaggtcatcacgctcaaggagggcgaccggatcgtcggc
gcgatggagctgcgcaccggcgaggaggacctggtgttcatcacggacgacgcgcagctg
ctgcgcttccaggcctccatcgtgcgtccgcagggccgcccggcgggcggtatggcgggc
atcaaggtcgccgagggcgcgaaggtcatctcgttcacggcggtcgacccggcggccgac
gcggtggtcttcacggtggcgggctcgcgcggcacgctggacgactccgtgcagacgacg
gccaagctgaccccgttcgaccagtacccgcgcaagggacgggccaccggcggcgtgcgc
tgccagcggttcctcaagggcgaggactgcctgtcgctggcctgggcgggcccggtcccg
gcccgggcggcgcagaagaacggcaccccggccgagctgcccgacgcggacccgcgccgg
gacggctcgggcacgtcgctggcgaagacggtgtcggtggtcgcgggaccggtgttctag
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