Streptomyces griseochromogenes: AVL59_12040
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Entry
AVL59_12040 CDS
T04729
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03030
DNA replication
sgs03430
Mismatch repair
sgs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AVL59_12040
03430 Mismatch repair
AVL59_12040
03440 Homologous recombination
AVL59_12040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgs03032
]
AVL59_12040
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_12040
Enzymes [BR:
sgs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AVL59_12040
DNA replication proteins [BR:
sgs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AVL59_12040
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AVL59_12040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ANP50249
UniProt:
A0A1B1AUJ2
LinkDB
All DBs
Position
2831910..2832641
Genome browser
AA seq
243 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVIEVRAGEPMGRREWLADPGVEIPADAVAVH
GISNERAAAEGRPADEVADAIAEVLVSYWRTGVPVVAYNAAFDLTLLSAELRRYGLPSLS
DRLGGLDPAPVVDPYTIDRWVDRYRRGKRNLEAVCAEYGIVLGAAHDASADALAAARLAS
AIADRHPKIASLGPAELHRSQIQWYAQWAADFQAFLRRKGDATAVVDGTWPLREPADLAD
ERV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggctcgcatcgtcaccggcgcggtgatcgaggtcagggccggtgagcccatgggg
cgccgggaatggctggcggatccgggcgtggagatcccggccgacgcggtggcggtgcac
ggcatcagcaacgaacgcgcggcggccgagggccgcccggccgacgaggtggccgacgcc
atcgcggaggtcctggtctcctactggaggacgggagtgccggtcgtggcctacaacgcg
gccttcgacctcaccctgctctccgccgaactgcgccggtacggcctgccgtccctctcc
gaccgcctcggcggcctcgacccggcgccggtcgtcgacccgtacaccatcgaccgctgg
gtcgaccgctaccgccgcggcaagcggaatctggaggcggtctgcgccgaatacggcata
gtcctcggcgcggctcacgacgcctcggccgacgccctcgccgcggcccgcctcgcctcc
gcgatagccgaccgccaccccaagatcgcctccctgggcccggcggagctgcaccgcagc
cagatccagtggtatgcgcagtgggctgcggacttccaggcgttcctgcgccgcaagggg
gacgcgaccgcggtggtcgacggcacgtggccgctgcgcgagccggcggacctggctgac
gaaagggtctga
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integrated database retrieval system
