Streptomyces griseochromogenes: AVL59_12615
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Entry
AVL59_12615 CDS
T04729
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVL59_12615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgs03000
]
AVL59_12615
03400 DNA repair and recombination proteins [BR:
sgs03400
]
AVL59_12615
Enzymes [BR:
sgs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AVL59_12615
Transcription factors [BR:
sgs03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AVL59_12615
DNA repair and recombination proteins [BR:
sgs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AVL59_12615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
DUF6233
Motif
Other DBs
NCBI-ProteinID:
ANP50349
UniProt:
A0A1B1AUT7
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All DBs
Position
2971243..2972652
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AA seq
469 aa
AA seq
DB search
MMDEDTRYEAVRSRDGRFDGAFFFAVETTGIYCRPSCPAVTPKRRNVRFFATAAAAQGSG
FRACRRCRPDAVPGSAEWNVRADAVGRAMRLIADGVVDREGVAGLASRLGYSARQVQRQL
TAELGAGPVALARAQRAHTARVLLQTTGLPVTEIAFASGFASVRQFNDTIREVYDATPTG
VRSAAPRGGGARRATPGAGIPLRLAHRGPYQAAAVFDQLAREAVPGVEEVSGAPGGRTYR
RTLRLPYGTAIVAVEERVRAPRAVGGTHPGGWLDARLHLTDPRDLTTAVQRLRRLFDLDA
DPYAVDERLGTDPRLAPLVAARPGLRSPGAVDPLEPAVRALVGVAAAQDLVRRYGKALDA
PCGSLTHLFPEPAALAGAEDQAESGGPLRALAAALADGNVHLDPGADRDDAQRALLALPG
MDPAAVAAVRVRALGDPDVAPPGVDAPDTWRPWRSYAVQHLRVAGELTH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtgatggacgaggacaccaggtacgaagcggtgcgcagccgggacggacggttcgacggg
gcgttcttcttcgccgtcgagacgaccgggatctactgccggccaagctgcccggcggtc
accccgaagcggcgcaacgtgcggttcttcgcgacggccgccgccgcgcagggctccggc
ttccgcgcctgccggcggtgccggccggacgccgtgccgggctccgccgagtggaacgta
cgcgcggacgccgtcggccgggccatgcgcctgatcgccgacggagtcgtcgaccgcgag
ggcgtcgcgggcctcgcctcccggctcggctacagcgcccgccaggtgcagcggcagctc
accgccgaactcggcgccggacccgtggccctcgcccgggcccagcgtgcgcacaccgcc
cgggtgctgctgcagaccacaggcctgcccgtcaccgagatcgccttcgcgtccggtttc
gccagcgtgcggcagttcaacgacacgatccgcgaggtgtacgacgcgacaccgaccggc
gtacggtccgccgcgccccggggcgggggagcccgccgcgccaccccgggcgcgggcatc
cccctccggctcgcccaccgcggcccctaccaggccgccgccgtcttcgaccagctggcg
cgggaggccgtacccggcgtcgaggaggtgagcggcgccccgggcggccgtacctaccgg
cgcaccctccggctgccgtacggcaccgcgatcgtcgccgtcgaggagcgggtccgggcg
ccgagggcggtcggcggcacgcatccgggcggttggctcgacgcacggctgcacctgacc
gacccacgggatctgaccaccgccgtccagcggctgcgacggcttttcgacctcgacgcc
gacccgtacgcggtggacgaacgcctcggcaccgacccacggctcgccccgctggtcgcg
gcccggcccggactgcgctcgcccggcgccgtcgatccgctggagcccgccgtacgggcg
ctcgtgggcgtggccgcggcgcaggacctggtccggcgctacggcaaggcgctcgacgcc
ccctgcggcagcctcacgcacctcttcccggagccggccgccctggccggggccgaggac
caggcggagtccggcggcccgctgcgcgcgctcgccgcggccctcgccgacgggaacgtg
cacctggacccgggcgccgaccgggacgacgcccagcgggcgttgctcgccctgcccggc
atggacccggccgccgtggccgccgtccgcgtccgcgccctcggcgatcccgatgtggcc
ccgcccggcgtggacgcgccggacacctggcggccctggcggtcgtacgccgtccagcat
ctgcgcgtcgcgggggagttgacccactga
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