Streptomyces griseochromogenes: AVL59_22755
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Entry
AVL59_22755 CDS
T04729
Name
(GenBank) type IV secretion protein Rhs
Organism
sgs
Streptomyces griseochromogenes
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
Endonuclea_NS_2
TEN_YD-shell
RHS
Motif
Other DBs
NCBI-ProteinID:
ANP52020
UniProt:
A0A1B1AZP7
LinkDB
All DBs
Position
complement(5329609..5334324)
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AA seq
1571 aa
AA seq
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MGYTIPGWLDEILDFIGIKFPNVDEDDYREMADAMRDFADKFEGHGADAHKAVSRILSSS
QGWAVDTMEKHWSHVKASHLEKLPELARLFATACDALADIIFGMKTKAEAELAIMAGSLG
ITAGLAVVTGGLSALIGAAETAAMRQVIKRIIDEAVDRIVDEVLAKITEPINAKLEAMVE
DMVLDLAEGAFSMPPASGGKEGHGGHGGHGGMKLASAGGDSGGAAGEGAQKVTHIDHIEF
EDGAGKVSRHGGELHLAASSPLSRAKGAFGRSKGRDPFTQAFDSVLHGALKGSEKALGKI
AKHVTDTVPDRVKATSRLHKGIDMDVRDRVRGIHINKADIGGGSEHGTVPGSGHKPDHDL
KIDSAKLSQQSHALNSREWCGDPIDMASGQMMLAQTDVDLPGVLPLTLRRTHLSGYEAGR
SFGPSWASTLDERLVDNRDVGGIWWYREDGSVLVYPRRPDVPGDRVLPVAGTPLPLTYVT
RGTSYVLTVEDPYTGLTRHFEPAAAEEGIWWLAEVQDRNRNIIGIDRGEDDAPLAVTHTG
GYRLQVTTDTVSDQIRVTALHALSDDGPVALRAFVYAESSGDLTEVRNAVNAPLHLTYDG
THRITSWRDSNDTAFTYEYDAQGRVIATRGTAGILNSTIVYAGPDADGVTTATYTDSLGH
ATVYRANRHGQVIAVTDPLGATTTQEWDRRDHLLSRTDPLGRTTRWEWDTAGDLVTTTAP
DGTVSRTVYNDLHLPVDWTGPDGTRILQEFDERGNRIAVTGPDGALTRFTHHPTGAPATL
TDALGARVQIEADQAGLLVAVEDSRGARTTCQRDTFGRPIALSDALGATTRLAWDAEHRL
VERVAADGTRESWSWDGEHNCLSYTDQTGGRSAFAYGPFDVLRTRTTADGAVYTFTHDTE
MRLTTVTEPAGLTWTYRYDERGALVAETDFDGRTTTSTYDAAGQLTTRRTPTGATFAFEY
DTVGDLRAKEADGARTEYTYDKAGRLTAAVCATSQVGLEYDAVGRMVAETVDGRTMRYRY
DAAGRRTGRTTPTGAVTETSWDTVGNCTGLTVADVHRLAFERDLLGREIQRSWGEQALLS
SSWDQLGRLTGQTLSLGEHRSHEREFTYRQDGYLTSVTDRGADRSLSYELDPLGRPLSVS
TRHGTTETYRYDPAGNQTHASWAGGFGDPDAAGDRAVAGTRLVSAGRIMYRHDSAGRLVE
RSRKRLSRKPDTWHYSWDAENRLTSCTTPDGTVWNYRYDALGRRTAKYRLAPDGTTAEEI
IFSWDGTRLAEQADATMGTVLTWEYDGYRPLTQYERKTISQDEVDARFFAMVTDLVGTPT
GLVDENAVAWHTRTTAWGTTAWNTDATAYTPLRFPGQYADPETGLHYNYFRHYDPETARY
ASPDPLGLGPGPNPVAYVTNPQTELDPLGLAPCNEQDVTWGGRVHYGPPGPGNRATGVRA
TLEPDMMGGKTRPRVNVPGYKKGGAWNKGHLLGAQLGGSNKDPRNFVAMHAYANSPVMRQ
VENDVRAAVDRGETITYHVTPIYRTNDPTDVVPVGVTIEAHGNRGFQFTPLGSDSPTNSV
TILNEPRPEER
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgggatacacgatcccgggctggctggacgagatcctggacttcatcgggatcaagttc
cccaacgtcgacgaggacgattaccgtgaaatggccgacgccatgcgggacttcgccgac
aagttcgagggccacggcgctgatgcgcacaaggcggtctcccggatcctgtcctcctcc
caggggtgggccgttgacacgatggagaagcactggagccacgtcaaggccagccatctg
gagaaactccctgagcttgcccgtctgttcgccaccgcctgcgacgccctcgcggacatc
atcttcggcatgaagaccaaggccgaggcggaactagccattatggccggatcattgggc
atcacggccggcctcgccgtcgtgaccggcggtctgtccgcgctcatcggcgcagccgag
accgcggcaatgcgccaggtgatcaagagaatcatcgacgaggccgtggaccggatcgtg
gacgaggttctggcaaagatcacggagccgatcaacgccaagctggaggcgatggtcgag
gacatggtgctcgacctcgccgagggggcgttctccatgccgcccgccagcgggggcaag
gaaggacacggaggtcatggcggccatggggggatgaagctcgcctcggccggcggcgac
tccggcggcgctgcgggcgagggcgcccagaaagtcacccatatcgaccacatcgagttc
gaagacggcgcgggcaaggtctcgcggcacggcggcgaactgcatctggccgcctcctcg
ccactgtcgcgggccaagggagctttcgggcggagcaagggccgcgatccgttcacgcag
gccttcgacagcgtgctgcacggcgcgctcaagggctcggagaaggcactcggcaagata
gccaagcatgtaacggatacggtgccggaccgggtgaaggccacctctcggctgcacaag
ggcatcgacatggacgtccgggaccgagtccgcggcatccacatcaacaaggctgacatc
ggtggcggttcggaacacggcacggtccccggatccggccacaagccagaccacgacttg
aagatcgactcggcgaagctctctcagcagtcccatgccctgaacagcagggaatggtgt
ggcgatccgatcgacatggccagcggccagatgatgttggctcagaccgatgtggacttg
ccaggcgtactgccgctgacgctgcgccgtactcatctcagtggctacgaggcagggcgc
tctttcggcccttcatgggcgtccactctggacgaacgccttgtggacaaccgggacgtg
ggcggcatctggtggtaccgggaagacggctcggttctggtctatccccgccgtcccgat
gtgcccggcgaccgggttcttcctgttgccggcaccccgctgcccctgacgtacgtcacg
cgcggcacctcttacgtccttaccgtggaggatccttacaccgggctgacccgtcacttc
gagccggccgcggcggaggagggcatctggtggttggcagaggtccaggaccgtaaccgc
aacatcatcggcatagaccggggcgaggacgacgctccgctcgccgtcacgcacaccggt
ggctatcgcctccaggtcaccaccgacaccgtcagcgaccagatacgcgtcaccgccctg
cacgcgctcagcgatgacggtcccgtcgcgctgcgcgcgttcgtctatgccgagagcagc
ggggatctgaccgaggtacgtaacgcggtcaatgccccgctgcacttgacctacgacggc
acgcaccgtatcaccagctggcgtgactccaacgacacggcgttcacgtacgagtacgac
gcgcagggccgggtgatcgctacccgagggaccgccggtatcctcaattccaccatcgtg
tacgccgggccggatgcggacggtgtcaccaccgcgacgtatacagactcgctgggccac
gccaccgtctaccgcgccaaccggcacggccaggtcatcgcggtgaccgacccgctcggc
gcgacaaccacccaggaatgggatcgacgcgaccatctgctgtcccgcaccgacccgttg
ggccgcaccacgcggtgggagtgggacaccgccggcgacctggtgaccaccacggcgcca
gacggcacggtcagccgcaccgtgtacaacgacctgcacctgcccgtcgactggacgggc
ccggacggcacccggatcctgcaggagttcgacgagcggggtaatcgcatcgcggtcacc
ggccctgacggcgcgctcacccgcttcacccaccatccaaccggagcaccggcgaccctg
accgacgcgctgggcgcgagggtacagatcgaagcggaccaggcgggattgttggttgcc
gtcgaggacagccgcggcgcccgcaccacctgccaacgggatacgttcggccgccccatc
gccctcagcgacgcgctcggcgccacgactcgtctggcctgggatgcggagcatcgcctg
gtggagcgggtcgccgccgacggaacacgcgaaagctggagctgggacggcgagcacaac
tgcctctcctacacggaccagaccggtggccgcagcgccttcgcctacggccccttcgac
gtgctgcgcacccgcaccaccgcggacggtgccgtgtacacgttcacccacgacaccgag
atgcggctgaccacggtcaccgaacccgctgggctcacctggacgtaccgctacgacgag
cggggtgccctggtggcggagacggacttcgacggccggacgacgaccagcacttacgat
gcggccggccagctgacgacccgccgcacccccacgggagcgacattcgccttcgagtac
gacacggtcggcgatctgcgggccaaggaggccgacggagcacgcaccgaatacacctac
gacaaggctggccgcctgactgccgcggtctgcgctacttcgcaggtcggcctggagtat
gacgctgtcgggcggatggtggccgaaacggtcgacgggcgtaccatgcgctaccgctac
gacgcggccggccggcgcaccggccgtacgacgcccaccggagcggtcaccgaaacgtcc
tgggacacggtaggtaactgcaccggcctgacagtcgcggacgtccaccgcttggccttc
gaacgcgacctgctgggccgcgagatccagcggagctggggcgagcaggcactcctctcc
tcttcctgggatcagctgggccgcctcaccggccagaccctttccctcggcgaacaccgg
tcccacgagcgggagttcacctaccgccaagacggctacctcacctccgtcaccgaccgc
ggagccgaccgcagcctgagctacgaactcgacccgctcggccgccccctgtccgtctcc
acccggcacggcaccaccgagacctaccgctacgaccctgcaggcaaccagacccacgcc
agctgggccggcgggttcggcgacccagatgcggcaggggaccgtgccgtggccgggacc
cgcctggtgtccgcagggcgcatcatgtatcggcacgacagcgcgggccgcctcgtcgaa
cgcagccgcaagcgcctgtcccgcaagccggacacgtggcactactcctgggacgcggaa
aaccggctcacgtcctgcactaccccggacggcaccgtctggaactaccgttacgacgcc
ctcgggcgccgcacagcgaagtaccgcctggccccggacggcaccaccgcggaagagatc
atcttcagctgggacggcacccgtctcgcagaacaagcggacgccaccatgggcacggtg
ctgacctgggaatacgacggctaccgtcccctgacccagtacgagcgcaagacgatttcg
caggacgaggtcgacgcccgcttcttcgccatggtcaccgacctggtgggcacgcccacg
ggacttgtcgacgagaacgcggtggcttggcacacccggaccaccgcatgggggaccacg
gcgtggaacaccgacgccacggcctacaccccgctgcgtttccccggccagtacgccgac
cccgaaaccggcttgcactacaactacttccggcactacgaccccgagaccgctcgctac
gccagccccgaccctcttggccttggcccgggccccaacccggtcgcctatgtgaccaac
ccgcagaccgagctcgatcccctgggcctagccccgtgcaacgagcaggacgtcacctgg
ggcggccgcgtccactacgggccaccgggcccgggcaatcgcgcgaccggtgtccgcgcc
acactggaacccgacatgatgggcggcaagacccgcccccgcgtcaacgtgcccggatac
aagaagggcggagcctggaacaagggccacctgctcggagcccagctcggcggctccaac
aaggacccacggaacttcgtggccatgcacgcctacgccaacagccccgtcatgcggcag
gtcgagaacgacgtgcgagcggccgtggaccgaggcgagaccatcacctatcacgtcaca
ccgatctaccggaccaacgaccccaccgatgtcgtgcccgtcggcgtcaccatcgaggcc
cacggcaaccgcggattccagttcacacccctgggctcggacagccccaccaactcggtc
actatcctgaacgaaccccgacccgaggaacgctga
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