Streptomyces griseochromogenes: AVL59_27065
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Entry
AVL59_27065 CDS
T04729
Name
(GenBank) RNA polymerase subunit sigma
KO
K03090
RNA polymerase sigma-B factor
Organism
sgs
Streptomyces griseochromogenes
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgs03021
]
AVL59_27065
Transcription machinery [BR:
sgs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AVL59_27065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_23
HTH_3
GerE
Sigma70_ECF
MarR_2
HTH_Crp_2
MarR
HTH_31
HTH_37
HTH_24
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ANP52707
UniProt:
A0A1B1B1L2
LinkDB
All DBs
Position
6291520..6292311
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AA seq
263 aa
AA seq
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MPVTGGTKSHPHDDAPDTSESFERLARLPDGPERRALRDELVRLWLPMAERIAVRFRGRG
ESLEDLYQVAALGLVKAVDHYEPSRGRAFEAYAVPTVTGEIKRHFRDHMWTLHVPRRVQD
LRNRVRGALKELAQTTSGRAPTVAEIAAHARLSEAEVRTGMEALECFSALSLDAEVTGTE
GYALGDCMGEPDPGFDLVVDRAAVKPCLQALPERERTILYLRFFGGMTQSRIAQQLGISQ
MHVSRLLSGCFDRLREELFAETG
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcactggcggcacgaagtcccatccccacgacgacgcccccgacacgtcggag
tccttcgagcggctcgcgcggctgcccgacggtcccgagcgccgggcgctcagggacgag
ctggtccggctctggctgcccatggccgagcggatcgccgtacggttccgcggccgcggg
gagtccctggaggacctgtaccaggtggccgcactcggtctggtgaaggccgtcgaccac
tacgagcccagccgcggccgcgccttcgaggcgtacgcggtccccaccgtcaccggcgag
atcaagcgccacttccgcgatcacatgtggaccctgcacgtgccgcgccgggtgcaagac
ctgcgcaaccgggtccgcggcgccctcaaggagctggcacagaccacgtccggccgggca
cccaccgttgcggagatcgccgcgcacgcccgtctcagcgaggccgaggtgcgcaccggc
atggaggccctggagtgcttctccgcgctgtccctggacgcggaggtgaccgggacggag
gggtacgcgctcggggactgcatgggcgagccggaccccggcttcgacctcgtggtcgac
cgtgccgcggtcaagccgtgcctccaggcgctgcccgaacgtgagcgcaccatcctctac
ctgcgcttcttcggcgggatgacgcagagccggatcgcccagcagttgggcatctcgcag
atgcacgtctcccggctgctcagcggctgcttcgaccggctgcgtgaggaactgttcgcg
gagaccggctga
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