Streptomyces griseochromogenes: AVL59_28965
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Entry
AVL59_28965 CDS
T04729
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sgs
Streptomyces griseochromogenes
Pathway
sgs04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sgs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AVL59_28965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgs03019
]
AVL59_28965
03009 Ribosome biogenesis [BR:
sgs03009
]
AVL59_28965
04131 Membrane trafficking [BR:
sgs04131
]
AVL59_28965
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgs04147
]
AVL59_28965
Messenger RNA biogenesis [BR:
sgs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
AVL59_28965
Ribosome biogenesis [BR:
sgs03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
AVL59_28965
Membrane trafficking [BR:
sgs04131
]
SNARE
SNARE associated proteins
Others
AVL59_28965
Autophagy
Aggrephagy
Other aggrephagy associated proteins
AVL59_28965
Exosome [BR:
sgs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AVL59_28965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Acetyltransf_1
Acetyltransf_7
AAA_5
Acetyltransf_10
Acetyltransf_6
AAA_28
RuvB_N
AAA_16
AAA_22
TIP49
Acetyltransf_9
AAA_lid_3
AAA_24
AAA_14
AAA_18
AAA_33
IPT
AAA_17
nSTAND3
AAA_19
AAA_25
RNA_helicase
TsaE
AAA_11
Vps4_C
Mg_chelatase
SKI
Cytidylate_kin
IstB_IS21
Zeta_toxin
IDM1_C
bpMoxR
NACHT
Motif
Other DBs
NCBI-ProteinID:
ANP53036
UniProt:
A0A1B1B2I6
LinkDB
All DBs
Position
6752280..6753557
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AA seq
425 aa
AA seq
DB search
MPAWHLRDYHEDDLDQAIQIWDQSRQADEDRVFPVSEVMAAAKAGQTAVVAEIGDELVGM
AVAQASGRRGWILLVALSSRWRERGIGSALLAELERRLRTLGVRHISALLPARAAGAKAL
ENSGYQLRDDLTYYEKLEPPSTANADVLAALGGRMLPEGLWDAMAGMEREKQVVERRVVL
PLTEPALADRYGVAPPKAVILFGPPGTGKTSFAKAVASRLGWPFVEIFPSRLAADTSEGL
AVALRGVFADLAELEAVVLFIDEVEEIAGARSGKAVDPGHGVTNELLKLIPVFREYDARI
LACATNSVRSLDAAFLRPGRFDYVIPIGPPDPTARAAIWARYLRPASDSVDLDQLVRASE
LFTPADIEFAARKGAQAAFEHEVTHRQGRPATTEDYMNAIADTRPTLTAQAIEEFTEDIE
TFSRL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcttggcatctgcgcgactatcacgaagacgatcttgaccaggccattcagatc
tgggaccagagccgccaggccgacgaggaccgggtgtttccggtctcggaggtgatggcc
gcggccaaggccggtcagacggcggtggtcgccgagatcggcgacgagctggtgggcatg
gccgtggcgcaggcgagcggcaggcgggggtggatcctgctggtggcactgtcctcccgg
tggcgcgagcgcgggatcgggagcgcgctcctcgccgagctcgaacgacgtctgcggacc
ttgggtgtgcgccacatcagtgcgctgctgcccgctcgtgccgccggggcgaaggctctg
gagaactccggctaccagctccgcgacgatctgacctactacgagaagctcgaaccgccc
agcaccgccaatgccgatgtcctcgcggcgctgggcgggcgcatgctgcccgaggggctc
tgggacgccatggccggtatggagcgggagaagcaggtcgtcgaacgccgtgtcgtgctc
ccgttgaccgagccggcgctggcggaccgctacggcgtggccccgcccaaagcggtcatc
ctgttcgggccgcccggcaccggaaagaccagtttcgccaaggcggtggcctcacggctc
ggctggccgttcgtggagatcttcccgtcccggctggcggccgacaccagtgaggggctg
gccgtcgcgctgcggggggtcttcgccgatctggcggaactggaggcggtggtgctcttc
atcgacgaggtcgaggagatcgccggtgcgcgctccgggaaagcggtcgaccccggtcat
ggagtgaccaacgaactcctcaaactcatccccgtcttccgtgagtacgacgcacggatt
ctggcctgtgccaccaactcggtccgctccctggacgcggcgttcctgcgaccgggccgg
ttcgactacgtcatccccatcggcccgccggatccgacggcccgcgcggcgatctgggcc
cgctatctcaggcccgcctccgactccgtggatctcgaccaactggtcagggccagtgag
ctgttcaccccggccgacatcgagttcgccgcacgcaagggcgcgcaggcagcgttcgaa
cacgaggtcacccaccgccagggaaggccggccaccaccgaggactacatgaacgccatc
gccgacacccggccgacgctcaccgcacaggcgatcgaagagttcacggaagacatcgag
acgttcagccggctctga
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